40 homologs were found in PanDaTox collection
for query gene Amir_6462 on replicon NC_013093
Organism: Actinosynnema mirum DSM 43827



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013093  Amir_6462  succinate dehydrogenase, cytochrome b556 subunit  100 
 
 		 140 aa  281  2.0000000000000002e-75  Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
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NC_013235  Namu_1311  succinate dehydrogenase, cytochrome b556 subunit  79.67 
 
 		 143 aa  205  2e-52  Nakamurella multipartita DSM 44233  Bacteria  normal  0.454603  normal  1 
 
 
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NC_013159  Svir_05380  succinate dehydrogenase subunit C  79.82 
 
 		 116 aa  196  7.999999999999999e-50  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.833154  normal  1 
 
 
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NC_007777  Francci3_0681  succinate dehydrogenase, cytochrome b subunit  63.71 
 
 		 131 aa  171  1.9999999999999998e-42  Frankia sp. CcI3  Bacteria  normal  0.414891  normal  0.0350115 
 
 
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NC_013131  Caci_0772  succinate dehydrogenase, cytochrome b556 subunit  61.24 
 
 		 132 aa  169  1e-41  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  0.200445 
 
 
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NC_008726  Mvan_1589  succinate dehydrogenase, cytochrome b subunit  68.42 
 
 		 142 aa  168  2e-41  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.603867  normal  0.335137 
 
 
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NC_013441  Gbro_1778  succinate dehydrogenase, cytochrome b556 subunit  57.25 
 
 		 139 aa  166  7e-41  Gordonia bronchialis DSM 43247  Bacteria  normal  1  n/a   
 
 
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NC_008705  Mkms_1247  succinate dehydrogenase, cytochrome b subunit  64.52 
 
 		 142 aa  166  8e-41  Mycobacterium sp. KMS  Bacteria  normal  0.59332  normal  1 
 
 
-
 
NC_008146  Mmcs_1230  succinate dehydrogenase, cytochrome b subunit  64.52 
 
 		 142 aa  166  8e-41  Mycobacterium sp. MCS  Bacteria  normal  0.490436  n/a   
 
 
-
 
NC_009077  Mjls_1256  succinate dehydrogenase, cytochrome b subunit  64.52 
 
 		 142 aa  166  8e-41  Mycobacterium sp. JLS  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009338  Mflv_4844  succinate dehydrogenase, cytochrome b subunit  68.22 
 
 		 142 aa  163  6.9999999999999995e-40  Mycobacterium gilvum PYR-GCK  Bacteria  normal  1  normal  1 
 
 
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NC_009565  TBFG_13347  succinate dehydrogenase cytochrome B-556 subunit sdhC  60.66 
 
 		 144 aa  160  6e-39  Mycobacterium tuberculosis F11  Bacteria  normal  1  normal  0.262183 
 
 
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NC_009664  Krad_3952  Succinate dehydrogenase cytochrome b556 subunit  60.63 
 
 		 139 aa  160  6e-39  Kineococcus radiotolerans SRS30216  Bacteria  normal  1  normal  0.013264 
 
 
-
 
NC_013521  Sked_25800  succinate dehydrogenase subunit C  59.69 
 
 		 126 aa  159  2e-38  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.180508  normal  0.930468 
 
 
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NC_013174  Jden_0821  succinate dehydrogenase, cytochrome b556 subunit  58.91 
 
 		 126 aa  155  1e-37  Jonesia denitrificans DSM 20603  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008541  Arth_1131  succinate dehydrogenase, cytochrome b subunit  59.38 
 
 		 126 aa  155  3e-37  Arthrobacter sp. FB24  Bacteria  normal  1  n/a   
 
 
-
 
NC_011886  Achl_1204  succinate dehydrogenase, cytochrome b556 subunit  57.81 
 
 		 126 aa  154  4e-37  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.000000580451 
 
 
-
 
NC_013530  Xcel_0990  succinate dehydrogenase, cytochrome b556 subunit  61.6 
 
 		 126 aa  152  1e-36  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.051901  n/a   
 
 
-
 
NC_012669  Bcav_2950  succinate dehydrogenase, cytochrome b556 subunit  60.77 
 
 		 142 aa  151  2e-36  Beutenbergia cavernae DSM 12333  Bacteria  normal  1  hitchhiker  0.000313262 
 
 
-
 
NC_012803  Mlut_04850  succinate dehydrogenase, cytochrome b556 subunit  54.74 
 
 		 134 aa  151  2e-36  Micrococcus luteus NCTC 2665  Bacteria  normal  1  n/a   
 
 
-
 
NC_014151  Cfla_1017  succinate dehydrogenase, cytochrome b556 subunit  57.78 
 
 		 132 aa  149  1e-35  Cellulomonas flavigena DSM 20109  Bacteria  normal  1  normal  1 
 
 
-
 
NC_014158  Tpau_0967  succinate dehydrogenase, cytochrome b556 subunit  57.26 
 
 		 134 aa  146  8e-35  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.226571  n/a   
 
 
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NC_013172  Bfae_21310  succinate dehydrogenase subunit C  66.34 
 
 		 125 aa  140  8e-33  Brachybacterium faecium DSM 4810  Bacteria  normal  1  n/a   
 
 
-
 
NC_013525  Tter_0787  succinate dehydrogenase, cytochrome b556 subunit  43.4 
 
 		 119 aa  104  4e-22  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_013124  Afer_0188  succinate dehydrogenase, cytochrome b556 subunit  39.52 
 
 		 138 aa  101  3e-21  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  1  n/a   
 
 
-
 
NC_008025  Dgeo_0889  succinate dehydrogenase, cytochrome b subunit  32.17 
 
 		 118 aa  72.8  0.000000000002  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.891271  normal  0.65854 
 
 
-
 
NC_013501  Rmar_0208  succinate dehydrogenase, cytochrome b556 subunit  31.67 
 
 		 136 aa  65.5  0.0000000002  Rhodothermus marinus DSM 4252  Bacteria  normal  1  n/a   
 
 
-
 
NC_010831  Cphamn1_2516  succinate dehydrogenase, cytochrome b556 subunit  31.43 
 
 		 154 aa  65.1  0.0000000003  Chlorobium phaeobacteroides BS1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011059  Paes_2257  succinate dehydrogenase, cytochrome b556 subunit  33.7 
 
 		 144 aa  63.2  0.000000001  Prosthecochloris aestuarii DSM 271  Bacteria  normal  0.0160285  normal  1 
 
 
-
 
NC_014212  Mesil_1435  succinate dehydrogenase, cytochrome b556 subunit  31.09 
 
 		 123 aa  61.6  0.000000004  Meiothermus silvanus DSM 9946  Bacteria  normal  0.362976  normal  1 
 
 
-
 
NC_013158  Huta_2835  succinate dehydrogenase, cytochrome b556 subunit  32 
 
 		 129 aa  52.4  0.000002  Halorhabdus utahensis DSM 12940  Archaea  normal  0.178148  n/a   
 
 
-
 
NC_013743  Htur_0933  succinate dehydrogenase, cytochrome b556 subunit  33.33 
 
 		 131 aa  51.2  0.000004  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_013202  Hmuk_2076  succinate dehydrogenase, cytochrome b556 subunit  33.78 
 
 		 131 aa  48.5  0.00003  Halomicrobium mukohataei DSM 12286  Archaea  normal  1  normal  1 
 
 
-
 
NC_009487  SaurJH9_1206  succinate dehydrogenase/fumarate reductase cytochrome b subunit  28.45 
 
 		 204 aa  48.1  0.00004  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  1  n/a   
 
 
-
 
NC_009632  SaurJH1_1228  succinate dehydrogenase/fumarate reductase cytochrome b subunit  28.45 
 
 		 204 aa  48.1  0.00004  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  1  n/a   
 
 
-
 
NC_013922  Nmag_3125  succinate dehydrogenase, cytochrome b556 subunit  32.18 
 
 		 143 aa  47.4  0.00007  Natrialba magadii ATCC 43099  Archaea  normal  1  n/a   
 
 
-
 
NC_002976  SERP0730  succinate dehydrogenase, cytochrome b558 subunit  27.5 
 
 		 204 aa  47  0.00009  Staphylococcus epidermidis RP62A  Bacteria  normal  0.545164  n/a   
 
 
-
 
NC_013525  Tter_0786  Succinate dehydrogenase hydrophobic anchor subunit-like protein  28.16 
 
 		 126 aa  43.1  0.001  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_012029  Hlac_1987  succinate dehydrogenase, cytochrome b556 subunit  34.57 
 
 		 142 aa  41.6  0.004  Halorubrum lacusprofundi ATCC 49239  Archaea  normal  0.241729  normal  0.34288 
 
 
-
 
NC_012803  Mlut_04840  succinate dehydrogenase subunit D  30.97 
 
 		 159 aa  40.8  0.006  Micrococcus luteus NCTC 2665  Bacteria  normal  1  n/a   
 
 
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