Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SERP0730 |
Symbol | sdhC |
ID | 3242121 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus epidermidis RP62A |
Kingdom | Bacteria |
Replicon accession | NC_002976 |
Strand | + |
Start bp | 730038 |
End bp | 730652 |
Gene Length | 615 bp |
Protein Length | 204 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 637167389 |
Product | succinate dehydrogenase, cytochrome b558 subunit |
Protein accession | YP_188313 |
Protein GI | 57866657 |
COG category | [C] Energy production and conversion |
COG ID | [COG2009] Succinate dehydrogenase/fumarate reductase, cytochrome b subunit |
TIGRFAM ID | [TIGR02046] succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family [TIGR02970] succinate dehydrogenase, cytochrome b556 subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.545164 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGCTCAAT CAAAGAATGA ATTTTACCTT AGAAGATTAC ATTCGTTATT AGGGGTTATT CCGATAGGTG CATTTTTAAT TGTACACTTA ATGGTAAACC ATCAAGCAAC GCAAGGTGCT GAAGCTTTTA ATAGAGCGTC AGGATTTATG GAATCTTTAC CATTCCTTAT TGTGATGGAA TTTATACTTA TTTATATACC ATTGTTATAC CATGGTTTGT TCGGTTTACA CATCGCTTTC ACTGCTAAGG AGAACATCGG ACATTACTCA TTATTTAGAA ACTGGATGTT TTTCTTCCAA CGTGTAAGTG GTATTTTAGC ATTTATTTTT ATTGCAATGC ACTTATGGCA AACACGTTTG CAGAAAGCTT TTTATGGTAA ATCTGTGGAC TATAATCTAA TGCATGAAAC ATTACAACAT CCGTTATGGG CAATCTTTTA CATTATTTGT GTCATTGCTG TTGTTTTCCA TTTTGCTAAT GGTTTATGGT CATTTTGTGT AACATGGGGC TTTTTACAAT CTAAAAAATC ACAACGTGTT TTTACTTGGA TTTCACTCAT AGTATTTTTA GTGATTTCTT ATATTGGTGT TGCAGCTGTT ATTGCGTTTA TATAA
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Protein sequence | MAQSKNEFYL RRLHSLLGVI PIGAFLIVHL MVNHQATQGA EAFNRASGFM ESLPFLIVME FILIYIPLLY HGLFGLHIAF TAKENIGHYS LFRNWMFFFQ RVSGILAFIF IAMHLWQTRL QKAFYGKSVD YNLMHETLQH PLWAIFYIIC VIAVVFHFAN GLWSFCVTWG FLQSKKSQRV FTWISLIVFL VISYIGVAAV IAFI
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