Gene Amir_6462 details

Gene Information

• Locus tag: Amir_6462
• ID: 8330673
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Actinosynnema mirum DSM 43827
• Kingdom: Bacteria
• Replicon accession: NC_013093
• Strand: +
• Start bp: 7600183
• End bp: 7600605
• Gene Length: 423 bp
• Protein Length: 140 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 644946890
• Product: succinate dehydrogenase, cytochrome b556 subunit
• Protein accession: YP_003104109
• Protein GI: 256380449
• COG category: [C] Energy production and conversion
• COG ID: [COG2009] Succinate dehydrogenase/fumarate reductase, cytochrome b subunit
• TIGRFAM ID: [TIGR02970] succinate dehydrogenase, cytochrome b556 subunit

Plasmid Coverage information

• Num covering plasmid clones: 24
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCCGGCA CCACCGCAAC CGGGCGGGCG GGCAGCTCCC GTGGAGGCGG AACGCTCTAC 
CGAGGCGACT TGGGCATGTG GTCCTGGGTC GCCCACCGCA TCACCGGCGT TCTGACCTTC 
TTCTTCTTGT TCGTGCACGT TCTGGACACC GCGCTCGTGC GGGTGTCCCC GAACGACTAC 
GACGCGGTCA TCGAGACCTA CAAGACCCCG CTGGTGAACC TCTTCGAGGT CGGCCTGGTC 
GGCGCGGTCC TCTACCACGC CCTCAACGGC GTCCGGGTCA TGCTGGTCGA CTTCTGGGCC 
AAGGGCCCGA AGCACCAGCG GGCGATGCTG TGGACCATCC TCGGCATCTG GGTCGCGGTC 
ATGATCCCCG GCACGTACTT CATGATGGTC CGCACGGTCA CCGAGATGTT CGGGGGTCAC 
TGA 

 

Protein sequence

MAGTTATGRA GSSRGGGTLY RGDLGMWSWV AHRITGVLTF FFLFVHVLDT ALVRVSPNDY 
DAVIETYKTP LVNLFEVGLV GAVLYHALNG VRVMLVDFWA KGPKHQRAML WTILGIWVAV 
MIPGTYFMMV RTVTEMFGGH