41 homologs were found in PanDaTox collection
for query gene Jden_0821 on replicon NC_013174
Organism: Jonesia denitrificans DSM 20603



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013174  Jden_0821  succinate dehydrogenase, cytochrome b556 subunit  100 
 
 		 126 aa  251  3e-66  Jonesia denitrificans DSM 20603  Bacteria  normal  1  normal  1 
 
 
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NC_013521  Sked_25800  succinate dehydrogenase subunit C  91.27 
 
 		 126 aa  236  1e-61  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.180508  normal  0.930468 
 
 
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NC_013530  Xcel_0990  succinate dehydrogenase, cytochrome b556 subunit  81.75 
 
 		 126 aa  216  8.999999999999998e-56  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.051901  n/a   
 
 
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NC_014151  Cfla_1017  succinate dehydrogenase, cytochrome b556 subunit  84.8 
 
 		 132 aa  213  5e-55  Cellulomonas flavigena DSM 20109  Bacteria  normal  1  normal  1 
 
 
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NC_012669  Bcav_2950  succinate dehydrogenase, cytochrome b556 subunit  84.17 
 
 		 142 aa  212  9.999999999999999e-55  Beutenbergia cavernae DSM 12333  Bacteria  normal  1  hitchhiker  0.000313262 
 
 
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NC_011886  Achl_1204  succinate dehydrogenase, cytochrome b556 subunit  72.22 
 
 		 126 aa  192  2e-48  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.000000580451 
 
 
-
 
NC_008541  Arth_1131  succinate dehydrogenase, cytochrome b subunit  71.43 
 
 		 126 aa  190  6e-48  Arthrobacter sp. FB24  Bacteria  normal  1  n/a   
 
 
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NC_013172  Bfae_21310  succinate dehydrogenase subunit C  72.58 
 
 		 125 aa  183  9e-46  Brachybacterium faecium DSM 4810  Bacteria  normal  1  n/a   
 
 
-
 
NC_009664  Krad_3952  Succinate dehydrogenase cytochrome b556 subunit  68.33 
 
 		 139 aa  171  1.9999999999999998e-42  Kineococcus radiotolerans SRS30216  Bacteria  normal  1  normal  0.013264 
 
 
-
 
NC_007777  Francci3_0681  succinate dehydrogenase, cytochrome b subunit  61.79 
 
 		 131 aa  167  3e-41  Frankia sp. CcI3  Bacteria  normal  0.414891  normal  0.0350115 
 
 
-
 
NC_013131  Caci_0772  succinate dehydrogenase, cytochrome b556 subunit  65.29 
 
 		 132 aa  167  5e-41  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  0.200445 
 
 
-
 
NC_012803  Mlut_04850  succinate dehydrogenase, cytochrome b556 subunit  62.79 
 
 		 134 aa  162  1.0000000000000001e-39  Micrococcus luteus NCTC 2665  Bacteria  normal  1  n/a   
 
 
-
 
NC_008146  Mmcs_1230  succinate dehydrogenase, cytochrome b subunit  68.52 
 
 		 142 aa  156  1e-37  Mycobacterium sp. MCS  Bacteria  normal  0.490436  n/a   
 
 
-
 
NC_008705  Mkms_1247  succinate dehydrogenase, cytochrome b subunit  68.52 
 
 		 142 aa  156  1e-37  Mycobacterium sp. KMS  Bacteria  normal  0.59332  normal  1 
 
 
-
 
NC_009077  Mjls_1256  succinate dehydrogenase, cytochrome b subunit  68.52 
 
 		 142 aa  156  1e-37  Mycobacterium sp. JLS  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013235  Namu_1311  succinate dehydrogenase, cytochrome b556 subunit  58.14 
 
 		 143 aa  154  5.0000000000000005e-37  Nakamurella multipartita DSM 44233  Bacteria  normal  0.454603  normal  1 
 
 
-
 
NC_013093  Amir_6462  succinate dehydrogenase, cytochrome b556 subunit  60.16 
 
 		 140 aa  153  7e-37  Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
-
 
NC_008726  Mvan_1589  succinate dehydrogenase, cytochrome b subunit  68.32 
 
 		 142 aa  152  1e-36  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.603867  normal  0.335137 
 
 
-
 
NC_009565  TBFG_13347  succinate dehydrogenase cytochrome B-556 subunit sdhC  65.66 
 
 		 144 aa  151  2e-36  Mycobacterium tuberculosis F11  Bacteria  normal  1  normal  0.262183 
 
 
-
 
NC_013441  Gbro_1778  succinate dehydrogenase, cytochrome b556 subunit  56.91 
 
 		 139 aa  152  2e-36  Gordonia bronchialis DSM 43247  Bacteria  normal  1  n/a   
 
 
-
 
NC_009338  Mflv_4844  succinate dehydrogenase, cytochrome b subunit  66.67 
 
 		 142 aa  152  2e-36  Mycobacterium gilvum PYR-GCK  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013159  Svir_05380  succinate dehydrogenase subunit C  58.77 
 
 		 116 aa  137  4.999999999999999e-32  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.833154  normal  1 
 
 
-
 
NC_014158  Tpau_0967  succinate dehydrogenase, cytochrome b556 subunit  56.03 
 
 		 134 aa  137  6e-32  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.226571  n/a   
 
 
-
 
NC_013525  Tter_0787  succinate dehydrogenase, cytochrome b556 subunit  44.23 
 
 		 119 aa  106  1e-22  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_008025  Dgeo_0889  succinate dehydrogenase, cytochrome b subunit  41.18 
 
 		 118 aa  87.4  6e-17  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.891271  normal  0.65854 
 
 
-
 
NC_013124  Afer_0188  succinate dehydrogenase, cytochrome b556 subunit  36.13 
 
 		 138 aa  87  9e-17  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  1  n/a   
 
 
-
 
NC_010831  Cphamn1_2516  succinate dehydrogenase, cytochrome b556 subunit  39.81 
 
 		 154 aa  75.9  0.0000000000002  Chlorobium phaeobacteroides BS1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013501  Rmar_0208  succinate dehydrogenase, cytochrome b556 subunit  39.25 
 
 		 136 aa  75.5  0.0000000000002  Rhodothermus marinus DSM 4252  Bacteria  normal  1  n/a   
 
 
-
 
NC_014212  Mesil_1435  succinate dehydrogenase, cytochrome b556 subunit  37.25 
 
 		 123 aa  67  0.00000000009  Meiothermus silvanus DSM 9946  Bacteria  normal  0.362976  normal  1 
 
 
-
 
NC_011059  Paes_2257  succinate dehydrogenase, cytochrome b556 subunit  36.14 
 
 		 144 aa  66.6  0.0000000001  Prosthecochloris aestuarii DSM 271  Bacteria  normal  0.0160285  normal  1 
 
 
-
 
NC_013743  Htur_0933  succinate dehydrogenase, cytochrome b556 subunit  39.19 
 
 		 131 aa  57.4  0.00000007  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_013158  Huta_2835  succinate dehydrogenase, cytochrome b556 subunit  37.04 
 
 		 129 aa  52.4  0.000002  Halorhabdus utahensis DSM 12940  Archaea  normal  0.178148  n/a   
 
 
-
 
NC_013922  Nmag_3125  succinate dehydrogenase, cytochrome b556 subunit  32.56 
 
 		 143 aa  47.8  0.00006  Natrialba magadii ATCC 43099  Archaea  normal  1  n/a   
 
 
-
 
NC_009050  Rsph17029_3885  succinate dehydrogenase, cytochrome b subunit  32 
 
 		 114 aa  47.4  0.00008  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  1  normal  0.0570697 
 
 
-
 
NC_007494  RSP_3148  putative succinate dehydrogenase cytochrome b-556 subunit  32 
 
 		 114 aa  47.4  0.00008  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.80265  n/a   
 
 
-
 
NC_013202  Hmuk_2076  succinate dehydrogenase, cytochrome b556 subunit  40.26 
 
 		 131 aa  47  0.00009  Halomicrobium mukohataei DSM 12286  Archaea  normal  1  normal  1 
 
 
-
 
NC_009632  SaurJH1_1228  succinate dehydrogenase/fumarate reductase cytochrome b subunit  31.87 
 
 		 204 aa  42.4  0.002  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009487  SaurJH9_1206  succinate dehydrogenase/fumarate reductase cytochrome b subunit  31.87 
 
 		 204 aa  42.4  0.002  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  1  n/a   
 
 
-
 
NC_009440  Msed_1113  succinate dehydrogenase, cytochrome b subunit  29.82 
 
 		 133 aa  42.4  0.002  Metallosphaera sedula DSM 5348  Archaea  normal  0.405795  normal  1 
 
 
-
 
NC_007802  Jann_3968  succinate dehydrogenase subunit C  30.38 
 
 		 114 aa  42.4  0.002  Jannaschia sp. CCS1  Bacteria  normal  1  normal  0.617218 
 
 
-
 
NC_002976  SERP0730  succinate dehydrogenase, cytochrome b558 subunit  29.29 
 
 		 204 aa  42  0.003  Staphylococcus epidermidis RP62A  Bacteria  normal  0.545164  n/a   
 
 
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