40 homologs were found in PanDaTox collection
for query gene Rmar_0208 on replicon NC_013501
Organism: Rhodothermus marinus DSM 4252



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013501  Rmar_0208  succinate dehydrogenase, cytochrome b556 subunit  100 
 
 		 136 aa  270  5.000000000000001e-72  Rhodothermus marinus DSM 4252  Bacteria  normal  1  n/a   
 
 
-
 
NC_010831  Cphamn1_2516  succinate dehydrogenase, cytochrome b556 subunit  43.12 
 
 		 154 aa  100  8e-21  Chlorobium phaeobacteroides BS1  Bacteria  normal  1  normal  1 
 
 
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NC_011059  Paes_2257  succinate dehydrogenase, cytochrome b556 subunit  47.32 
 
 		 144 aa  97.8  4e-20  Prosthecochloris aestuarii DSM 271  Bacteria  normal  0.0160285  normal  1 
 
 
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NC_009338  Mflv_4844  succinate dehydrogenase, cytochrome b subunit  41.03 
 
 		 142 aa  89  2e-17  Mycobacterium gilvum PYR-GCK  Bacteria  normal  1  normal  1 
 
 
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NC_013441  Gbro_1778  succinate dehydrogenase, cytochrome b556 subunit  34.78 
 
 		 139 aa  85.9  2e-16  Gordonia bronchialis DSM 43247  Bacteria  normal  1  n/a   
 
 
-
 
NC_008726  Mvan_1589  succinate dehydrogenase, cytochrome b subunit  41.07 
 
 		 142 aa  83.2  0.000000000000001  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.603867  normal  0.335137 
 
 
-
 
NC_009664  Krad_3952  Succinate dehydrogenase cytochrome b556 subunit  44.68 
 
 		 139 aa  78.6  0.00000000000002  Kineococcus radiotolerans SRS30216  Bacteria  normal  1  normal  0.013264 
 
 
-
 
NC_009565  TBFG_13347  succinate dehydrogenase cytochrome B-556 subunit sdhC  37.6 
 
 		 144 aa  76.6  0.0000000000001  Mycobacterium tuberculosis F11  Bacteria  normal  1  normal  0.262183 
 
 
-
 
NC_013521  Sked_25800  succinate dehydrogenase subunit C  37.38 
 
 		 126 aa  75.9  0.0000000000002  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.180508  normal  0.930468 
 
 
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NC_009077  Mjls_1256  succinate dehydrogenase, cytochrome b subunit  35.29 
 
 		 142 aa  75.9  0.0000000000002  Mycobacterium sp. JLS  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008705  Mkms_1247  succinate dehydrogenase, cytochrome b subunit  35.29 
 
 		 142 aa  75.9  0.0000000000002  Mycobacterium sp. KMS  Bacteria  normal  0.59332  normal  1 
 
 
-
 
NC_013174  Jden_0821  succinate dehydrogenase, cytochrome b556 subunit  39.25 
 
 		 126 aa  75.5  0.0000000000002  Jonesia denitrificans DSM 20603  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008146  Mmcs_1230  succinate dehydrogenase, cytochrome b subunit  35.29 
 
 		 142 aa  75.9  0.0000000000002  Mycobacterium sp. MCS  Bacteria  normal  0.490436  n/a   
 
 
-
 
NC_014158  Tpau_0967  succinate dehydrogenase, cytochrome b556 subunit  33.61 
 
 		 134 aa  74.7  0.0000000000004  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.226571  n/a   
 
 
-
 
NC_012669  Bcav_2950  succinate dehydrogenase, cytochrome b556 subunit  40.21 
 
 		 142 aa  73.2  0.000000000001  Beutenbergia cavernae DSM 12333  Bacteria  normal  1  hitchhiker  0.000313262 
 
 
-
 
NC_014151  Cfla_1017  succinate dehydrogenase, cytochrome b556 subunit  36.96 
 
 		 132 aa  72.4  0.000000000002  Cellulomonas flavigena DSM 20109  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013172  Bfae_21310  succinate dehydrogenase subunit C  40 
 
 		 125 aa  71.6  0.000000000003  Brachybacterium faecium DSM 4810  Bacteria  normal  1  n/a   
 
 
-
 
NC_014212  Mesil_1435  succinate dehydrogenase, cytochrome b556 subunit  44.44 
 
 		 123 aa  72  0.000000000003  Meiothermus silvanus DSM 9946  Bacteria  normal  0.362976  normal  1 
 
 
-
 
NC_013530  Xcel_0990  succinate dehydrogenase, cytochrome b556 subunit  36.45 
 
 		 126 aa  71.2  0.000000000005  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.051901  n/a   
 
 
-
 
NC_007777  Francci3_0681  succinate dehydrogenase, cytochrome b subunit  38.32 
 
 		 131 aa  70.5  0.000000000008  Frankia sp. CcI3  Bacteria  normal  0.414891  normal  0.0350115 
 
 
-
 
NC_012803  Mlut_04850  succinate dehydrogenase, cytochrome b556 subunit  38.18 
 
 		 134 aa  69.7  0.00000000001  Micrococcus luteus NCTC 2665  Bacteria  normal  1  n/a   
 
 
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NC_008541  Arth_1131  succinate dehydrogenase, cytochrome b subunit  35.58 
 
 		 126 aa  69.7  0.00000000001  Arthrobacter sp. FB24  Bacteria  normal  1  n/a   
 
 
-
 
NC_013124  Afer_0188  succinate dehydrogenase, cytochrome b556 subunit  35.43 
 
 		 138 aa  68.6  0.00000000003  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  1  n/a   
 
 
-
 
NC_008025  Dgeo_0889  succinate dehydrogenase, cytochrome b subunit  41.76 
 
 		 118 aa  68.6  0.00000000003  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.891271  normal  0.65854 
 
 
-
 
NC_013235  Namu_1311  succinate dehydrogenase, cytochrome b556 subunit  39.36 
 
 		 143 aa  68.2  0.00000000004  Nakamurella multipartita DSM 44233  Bacteria  normal  0.454603  normal  1 
 
 
-
 
NC_013525  Tter_0787  succinate dehydrogenase, cytochrome b556 subunit  34.48 
 
 		 119 aa  67.4  0.00000000007  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_011886  Achl_1204  succinate dehydrogenase, cytochrome b556 subunit  39.08 
 
 		 126 aa  66.2  0.0000000001  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.000000580451 
 
 
-
 
NC_013093  Amir_6462  succinate dehydrogenase, cytochrome b556 subunit  31.67 
 
 		 140 aa  65.9  0.0000000002  Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
-
 
NC_013131  Caci_0772  succinate dehydrogenase, cytochrome b556 subunit  38.38 
 
 		 132 aa  62.4  0.000000002  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  0.200445 
 
 
-
 
NC_013159  Svir_05380  succinate dehydrogenase subunit C  34.78 
 
 		 116 aa  62  0.000000003  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.833154  normal  1 
 
 
-
 
NC_007494  RSP_3148  putative succinate dehydrogenase cytochrome b-556 subunit  37.8 
 
 		 114 aa  53.5  0.0000009  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.80265  n/a   
 
 
-
 
NC_009050  Rsph17029_3885  succinate dehydrogenase, cytochrome b subunit  37.8 
 
 		 114 aa  53.5  0.0000009  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  1  normal  0.0570697 
 
 
-
 
NC_007802  Jann_3968  succinate dehydrogenase subunit C  39.02 
 
 		 114 aa  53.1  0.000001  Jannaschia sp. CCS1  Bacteria  normal  1  normal  0.617218 
 
 
-
 
NC_013743  Htur_0933  succinate dehydrogenase, cytochrome b556 subunit  30.89 
 
 		 131 aa  50.8  0.000006  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_013158  Huta_2835  succinate dehydrogenase, cytochrome b556 subunit  33.07 
 
 		 129 aa  48.9  0.00002  Halorhabdus utahensis DSM 12940  Archaea  normal  0.178148  n/a   
 
 
-
 
NC_013202  Hmuk_2076  succinate dehydrogenase, cytochrome b556 subunit  30 
 
 		 131 aa  45.4  0.0002  Halomicrobium mukohataei DSM 12286  Archaea  normal  1  normal  1 
 
 
-
 
NC_014158  Tpau_0966  succinate dehydrogenase cytochrome b subunit  31.3 
 
 		 155 aa  44.3  0.0006  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.151331  n/a   
 
 
-
 
NC_010510  Mrad2831_5987  succinate dehydrogenase cytochrome b subunit  30.23 
 
 		 125 aa  40.8  0.007  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.340501  normal  0.95264 
 
 
-
 
NC_013922  Nmag_3125  succinate dehydrogenase, cytochrome b556 subunit  26.52 
 
 		 143 aa  40.4  0.008  Natrialba magadii ATCC 43099  Archaea  normal  1  n/a   
 
 
-
 
NC_009720  Xaut_1967  succinate dehydrogenase cytochrome b556 subunit  35.48 
 
 		 133 aa  40.4  0.009  Xanthobacter autotrophicus Py2  Bacteria  normal  1  normal  0.124029 
 
 
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