Gene Afer_0188 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAfer_0188 
Symbol 
ID8322241 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidimicrobium ferrooxidans DSM 10331 
KingdomBacteria 
Replicon accessionNC_013124 
Strand- 
Start bp193932 
End bp194348 
Gene Length417 bp 
Protein Length138 aa 
Translation table11 
GC content63% 
IMG OID644951335 
Productsuccinate dehydrogenase, cytochrome b556 subunit 
Protein accessionYP_003108830 
Protein GI256371006 
COG category[C] Energy production and conversion 
COG ID[COG2009] Succinate dehydrogenase/fumarate reductase, cytochrome b subunit 
TIGRFAM ID[TIGR02970] succinate dehydrogenase, cytochrome b556 subunit 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGTCGC CAGCGACGCC GGCTCCGGCT GGAGGGCGCG CAGTACGAGC GCGCGCCTCG 
ATGTATCGAG GCAAGACCGG CCAGTGGGCG TTCATCCTCC ATCGGGTCAC CGGCTTCCTC 
GTCTTCATGT TCATCCTGCT CCACATCGTC GACGTCGCCA CGCTGAACGA CCCGCACGTC 
TACGAACAGA TCCACCAGCT CTACGGCAAC ATCTTCCTGC GCCTGTTCGA GGTCGGCCTG 
CTCTTCGCCC TCCTCTACCA CGCGCTGAAC GGTCTGCGAG TGATCATGAT CGACTTCTTC 
CCGGGCGCCG TCCGCAACGA ACGAGCGCTC TTCCAGGCCA TGCTCGGACT CAGCGTGCTG 
CTGACGATCG TCGGTGGCTA CTACATCGTC AAGCCGTTCT TCGTGGGGGT GCACTGA
 
Protein sequence
MTSPATPAPA GGRAVRARAS MYRGKTGQWA FILHRVTGFL VFMFILLHIV DVATLNDPHV 
YEQIHQLYGN IFLRLFEVGL LFALLYHALN GLRVIMIDFF PGAVRNERAL FQAMLGLSVL 
LTIVGGYYIV KPFFVGVH