45 homologs were found in PanDaTox collection
for query gene Gbro_1778 on replicon NC_013441
Organism: Gordonia bronchialis DSM 43247



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013441  Gbro_1778  succinate dehydrogenase, cytochrome b556 subunit  100 
 
 		 139 aa  284  2e-76  Gordonia bronchialis DSM 43247  Bacteria  normal  1  n/a   
 
 
-
 
NC_008726  Mvan_1589  succinate dehydrogenase, cytochrome b subunit  69.84 
 
 		 142 aa  187  4e-47  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.603867  normal  0.335137 
 
 
-
 
NC_009338  Mflv_4844  succinate dehydrogenase, cytochrome b subunit  67.21 
 
 		 142 aa  183  8e-46  Mycobacterium gilvum PYR-GCK  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008146  Mmcs_1230  succinate dehydrogenase, cytochrome b subunit  68.14 
 
 		 142 aa  176  8e-44  Mycobacterium sp. MCS  Bacteria  normal  0.490436  n/a   
 
 
-
 
NC_008705  Mkms_1247  succinate dehydrogenase, cytochrome b subunit  68.14 
 
 		 142 aa  176  8e-44  Mycobacterium sp. KMS  Bacteria  normal  0.59332  normal  1 
 
 
-
 
NC_009077  Mjls_1256  succinate dehydrogenase, cytochrome b subunit  68.14 
 
 		 142 aa  176  8e-44  Mycobacterium sp. JLS  Bacteria  normal  1  normal  1 
 
 
-
 
NC_014158  Tpau_0967  succinate dehydrogenase, cytochrome b556 subunit  60.45 
 
 		 134 aa  174  4e-43  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.226571  n/a   
 
 
-
 
NC_009565  TBFG_13347  succinate dehydrogenase cytochrome B-556 subunit sdhC  64 
 
 		 144 aa  168  2e-41  Mycobacterium tuberculosis F11  Bacteria  normal  1  normal  0.262183 
 
 
-
 
NC_013093  Amir_6462  succinate dehydrogenase, cytochrome b556 subunit  57.25 
 
 		 140 aa  165  2e-40  Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
-
 
NC_007777  Francci3_0681  succinate dehydrogenase, cytochrome b subunit  63.39 
 
 		 131 aa  161  2.0000000000000002e-39  Frankia sp. CcI3  Bacteria  normal  0.414891  normal  0.0350115 
 
 
-
 
NC_013131  Caci_0772  succinate dehydrogenase, cytochrome b556 subunit  57.26 
 
 		 132 aa  161  4.0000000000000004e-39  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  0.200445 
 
 
-
 
NC_013235  Namu_1311  succinate dehydrogenase, cytochrome b556 subunit  52.11 
 
 		 143 aa  159  1e-38  Nakamurella multipartita DSM 44233  Bacteria  normal  0.454603  normal  1 
 
 
-
 
NC_013521  Sked_25800  succinate dehydrogenase subunit C  60.16 
 
 		 126 aa  158  2e-38  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.180508  normal  0.930468 
 
 
-
 
NC_012669  Bcav_2950  succinate dehydrogenase, cytochrome b556 subunit  61.4 
 
 		 142 aa  156  7e-38  Beutenbergia cavernae DSM 12333  Bacteria  normal  1  hitchhiker  0.000313262 
 
 
-
 
NC_008541  Arth_1131  succinate dehydrogenase, cytochrome b subunit  60.16 
 
 		 126 aa  156  8e-38  Arthrobacter sp. FB24  Bacteria  normal  1  n/a   
 
 
-
 
NC_013530  Xcel_0990  succinate dehydrogenase, cytochrome b556 subunit  61.79 
 
 		 126 aa  155  2e-37  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.051901  n/a   
 
 
-
 
NC_011886  Achl_1204  succinate dehydrogenase, cytochrome b556 subunit  59.35 
 
 		 126 aa  155  2e-37  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.000000580451 
 
 
-
 
NC_013174  Jden_0821  succinate dehydrogenase, cytochrome b556 subunit  56.91 
 
 		 126 aa  152  2e-36  Jonesia denitrificans DSM 20603  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013159  Svir_05380  succinate dehydrogenase subunit C  62.83 
 
 		 116 aa  152  2e-36  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.833154  normal  1 
 
 
-
 
NC_014151  Cfla_1017  succinate dehydrogenase, cytochrome b556 subunit  69.15 
 
 		 132 aa  151  2.9999999999999998e-36  Cellulomonas flavigena DSM 20109  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009664  Krad_3952  Succinate dehydrogenase cytochrome b556 subunit  53.73 
 
 		 139 aa  150  5e-36  Kineococcus radiotolerans SRS30216  Bacteria  normal  1  normal  0.013264 
 
 
-
 
NC_012803  Mlut_04850  succinate dehydrogenase, cytochrome b556 subunit  55.56 
 
 		 134 aa  145  2.0000000000000003e-34  Micrococcus luteus NCTC 2665  Bacteria  normal  1  n/a   
 
 
-
 
NC_013172  Bfae_21310  succinate dehydrogenase subunit C  65.26 
 
 		 125 aa  140  7e-33  Brachybacterium faecium DSM 4810  Bacteria  normal  1  n/a   
 
 
-
 
NC_013525  Tter_0787  succinate dehydrogenase, cytochrome b556 subunit  47.32 
 
 		 119 aa  110  8.000000000000001e-24  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_013124  Afer_0188  succinate dehydrogenase, cytochrome b556 subunit  39.84 
 
 		 138 aa  98.2  4e-20  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  1  n/a   
 
 
-
 
NC_008025  Dgeo_0889  succinate dehydrogenase, cytochrome b subunit  40.59 
 
 		 118 aa  86.7  1e-16  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.891271  normal  0.65854 
 
 
-
 
NC_013501  Rmar_0208  succinate dehydrogenase, cytochrome b556 subunit  34.78 
 
 		 136 aa  85.9  2e-16  Rhodothermus marinus DSM 4252  Bacteria  normal  1  n/a   
 
 
-
 
NC_011059  Paes_2257  succinate dehydrogenase, cytochrome b556 subunit  38.04 
 
 		 144 aa  77  0.00000000000008  Prosthecochloris aestuarii DSM 271  Bacteria  normal  0.0160285  normal  1 
 
 
-
 
NC_010831  Cphamn1_2516  succinate dehydrogenase, cytochrome b556 subunit  34.65 
 
 		 154 aa  73.9  0.0000000000007  Chlorobium phaeobacteroides BS1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_014212  Mesil_1435  succinate dehydrogenase, cytochrome b556 subunit  36 
 
 		 123 aa  68.2  0.00000000003  Meiothermus silvanus DSM 9946  Bacteria  normal  0.362976  normal  1 
 
 
-
 
NC_013743  Htur_0933  succinate dehydrogenase, cytochrome b556 subunit  32.32 
 
 		 131 aa  62.4  0.000000002  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_013158  Huta_2835  succinate dehydrogenase, cytochrome b556 subunit  32.63 
 
 		 129 aa  59.3  0.00000002  Halorhabdus utahensis DSM 12940  Archaea  normal  0.178148  n/a   
 
 
-
 
NC_013922  Nmag_3125  succinate dehydrogenase, cytochrome b556 subunit  30.84 
 
 		 143 aa  56.2  0.0000001  Natrialba magadii ATCC 43099  Archaea  normal  1  n/a   
 
 
-
 
NC_007802  Jann_3968  succinate dehydrogenase subunit C  34.88 
 
 		 114 aa  53.5  0.0000008  Jannaschia sp. CCS1  Bacteria  normal  1  normal  0.617218 
 
 
-
 
NC_013202  Hmuk_2076  succinate dehydrogenase, cytochrome b556 subunit  32.29 
 
 		 131 aa  53.5  0.0000009  Halomicrobium mukohataei DSM 12286  Archaea  normal  1  normal  1 
 
 
-
 
NC_007494  RSP_3148  putative succinate dehydrogenase cytochrome b-556 subunit  31.03 
 
 		 114 aa  51.6  0.000003  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.80265  n/a   
 
 
-
 
NC_009050  Rsph17029_3885  succinate dehydrogenase, cytochrome b subunit  31.03 
 
 		 114 aa  51.6  0.000003  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  1  normal  0.0570697 
 
 
-
 
NC_012029  Hlac_1987  succinate dehydrogenase, cytochrome b556 subunit  33.73 
 
 		 142 aa  46.6  0.0001  Halorubrum lacusprofundi ATCC 49239  Archaea  normal  0.241729  normal  0.34288 
 
 
-
 
NC_010510  Mrad2831_5987  succinate dehydrogenase cytochrome b subunit  24.58 
 
 		 125 aa  43.1  0.001  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.340501  normal  0.95264 
 
 
-
 
NC_009487  SaurJH9_1206  succinate dehydrogenase/fumarate reductase cytochrome b subunit  27.59 
 
 		 204 aa  43.5  0.001  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  1  n/a   
 
 
-
 
NC_009632  SaurJH1_1228  succinate dehydrogenase/fumarate reductase cytochrome b subunit  27.59 
 
 		 204 aa  43.5  0.001  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  1  n/a   
 
 
-
 
NC_013525  Tter_0786  Succinate dehydrogenase hydrophobic anchor subunit-like protein  30.59 
 
 		 126 aa  42.7  0.002  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_009664  Krad_3953  Succinate dehydrogenase hydrophobic anchor subunit-like  23.14 
 
 		 169 aa  42.4  0.002  Kineococcus radiotolerans SRS30216  Bacteria  normal  1  normal  0.0138946 
 
 
-
 
NC_012803  Mlut_04840  succinate dehydrogenase subunit D  24.24 
 
 		 159 aa  41.6  0.004  Micrococcus luteus NCTC 2665  Bacteria  normal  1  n/a   
 
 
-
 
NC_008698  Tpen_1124  putative succinate dehydrogenase cytochrome b subunit  25.26 
 
 		 114 aa  40.8  0.006  Thermofilum pendens Hrk 5  Archaea  normal  0.454287  n/a   
 
 
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