| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_1124 |
|---|
| Symbol | |
|---|
| ID | 4602019 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermofilum pendens Hrk 5 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008698 |
|---|
| Strand | - |
|---|
| Start bp | 1063662 |
|---|
| End bp | 1064006 |
|---|
| Gene Length | 345 bp |
|---|
| Protein Length | 114 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 639773900 |
|---|
| Product | putative succinate dehydrogenase cytochrome b subunit |
|---|
| Protein accession | YP_920525 |
|---|
| Protein GI | 119720030 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.454287 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCTTCCG GTAAAAGCGG GGTAGCCTGG TTCCTCCAGG CAGTAACCGG AGCAGTGCTC
GCGCTAGCCG TCTCAGCCCA CATAGTCAGA GTGCACCTGC TCGGGTCGGC GCACGGCATA
CCCACCTACG AAGAGGTCTT GGCGGCTCTC AAGAACCCGC TCGTAATGCT CGGAGAGCTC
GTACTGGCGT TCTCGGCTAC CTACCACGCT CTATACGGGC TCCACATGGT CCTCGTGGAG
TCGAAGTTGC TGAGCGAGGA GAAATCCAGA AAAGTACTGA CAGCGCTGGG GATAGCGCTA
GCCACGTGGA TAGTAGCATT CAACGTGCTA GTGCTACTAA AATAA
|
|---|
| Protein sequence | MPSGKSGVAW FLQAVTGAVL ALAVSAHIVR VHLLGSAHGI PTYEEVLAAL KNPLVMLGEL
VLAFSATYHA LYGLHMVLVE SKLLSEEKSR KVLTALGIAL ATWIVAFNVL VLLK
|
|---|
| |