34 homologs were found in PanDaTox collection
for query gene Hlac_1987 on replicon NC_012029
Organism: Halorubrum lacusprofundi ATCC 49239



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_012029  Hlac_1987  succinate dehydrogenase, cytochrome b556 subunit  100 
 
 		 142 aa  282  1.0000000000000001e-75  Halorubrum lacusprofundi ATCC 49239  Archaea  normal  0.241729  normal  0.34288 
 
 
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NC_013922  Nmag_3125  succinate dehydrogenase, cytochrome b556 subunit  78.57 
 
 		 143 aa  232  1.0000000000000001e-60  Natrialba magadii ATCC 43099  Archaea  normal  1  n/a   
 
 
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NC_013202  Hmuk_2076  succinate dehydrogenase, cytochrome b556 subunit  72.86 
 
 		 131 aa  202  2e-51  Halomicrobium mukohataei DSM 12286  Archaea  normal  1  normal  1 
 
 
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NC_013743  Htur_0933  succinate dehydrogenase, cytochrome b556 subunit  70.71 
 
 		 131 aa  199  9.999999999999999e-51  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
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NC_013158  Huta_2835  succinate dehydrogenase, cytochrome b556 subunit  65 
 
 		 129 aa  186  1e-46  Halorhabdus utahensis DSM 12940  Archaea  normal  0.178148  n/a   
 
 
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NC_007777  Francci3_0681  succinate dehydrogenase, cytochrome b subunit  32.17 
 
 		 131 aa  57.8  0.00000005  Frankia sp. CcI3  Bacteria  normal  0.414891  normal  0.0350115 
 
 
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NC_013441  Gbro_1778  succinate dehydrogenase, cytochrome b556 subunit  32.03 
 
 		 139 aa  56.2  0.0000002  Gordonia bronchialis DSM 43247  Bacteria  normal  1  n/a   
 
 
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NC_011059  Paes_2257  succinate dehydrogenase, cytochrome b556 subunit  33.66 
 
 		 144 aa  52.8  0.000002  Prosthecochloris aestuarii DSM 271  Bacteria  normal  0.0160285  normal  1 
 
 
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NC_013525  Tter_0787  succinate dehydrogenase, cytochrome b556 subunit  32.2 
 
 		 119 aa  52.4  0.000002  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
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NC_009664  Krad_3952  Succinate dehydrogenase cytochrome b556 subunit  30.7 
 
 		 139 aa  52  0.000003  Kineococcus radiotolerans SRS30216  Bacteria  normal  1  normal  0.013264 
 
 
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NC_013124  Afer_0188  succinate dehydrogenase, cytochrome b556 subunit  27.62 
 
 		 138 aa  50.4  0.000007  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  1  n/a   
 
 
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NC_013235  Namu_1311  succinate dehydrogenase, cytochrome b556 subunit  34.09 
 
 		 143 aa  48.9  0.00002  Nakamurella multipartita DSM 44233  Bacteria  normal  0.454603  normal  1 
 
 
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NC_010831  Cphamn1_2516  succinate dehydrogenase, cytochrome b556 subunit  33.04 
 
 		 154 aa  48.9  0.00002  Chlorobium phaeobacteroides BS1  Bacteria  normal  1  normal  1 
 
 
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NC_008726  Mvan_1589  succinate dehydrogenase, cytochrome b subunit  31.07 
 
 		 142 aa  48.1  0.00004  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.603867  normal  0.335137 
 
 
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NC_009338  Mflv_4844  succinate dehydrogenase, cytochrome b subunit  31.25 
 
 		 142 aa  47.8  0.00005  Mycobacterium gilvum PYR-GCK  Bacteria  normal  1  normal  1 
 
 
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NC_013093  Amir_6462  succinate dehydrogenase, cytochrome b556 subunit  36.05 
 
 		 140 aa  47.8  0.00005  Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
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NC_009565  TBFG_13347  succinate dehydrogenase cytochrome B-556 subunit sdhC  29.55 
 
 		 144 aa  46.2  0.0001  Mycobacterium tuberculosis F11  Bacteria  normal  1  normal  0.262183 
 
 
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NC_008705  Mkms_1247  succinate dehydrogenase, cytochrome b subunit  27.78 
 
 		 142 aa  45.8  0.0002  Mycobacterium sp. KMS  Bacteria  normal  0.59332  normal  1 
 
 
-
 
NC_008146  Mmcs_1230  succinate dehydrogenase, cytochrome b subunit  27.78 
 
 		 142 aa  45.8  0.0002  Mycobacterium sp. MCS  Bacteria  normal  0.490436  n/a   
 
 
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NC_013159  Svir_05380  succinate dehydrogenase subunit C  34.12 
 
 		 116 aa  45.8  0.0002  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.833154  normal  1 
 
 
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NC_009077  Mjls_1256  succinate dehydrogenase, cytochrome b subunit  27.78 
 
 		 142 aa  45.8  0.0002  Mycobacterium sp. JLS  Bacteria  normal  1  normal  1 
 
 
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NC_012803  Mlut_04850  succinate dehydrogenase, cytochrome b556 subunit  32.32 
 
 		 134 aa  44.7  0.0005  Micrococcus luteus NCTC 2665  Bacteria  normal  1  n/a   
 
 
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NC_014158  Tpau_0967  succinate dehydrogenase, cytochrome b556 subunit  30.68 
 
 		 134 aa  43.9  0.0007  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.226571  n/a   
 
 
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NC_008541  Arth_1131  succinate dehydrogenase, cytochrome b subunit  29.91 
 
 		 126 aa  43.9  0.0007  Arthrobacter sp. FB24  Bacteria  normal  1  n/a   
 
 
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NC_013172  Bfae_21310  succinate dehydrogenase subunit C  24.19 
 
 		 125 aa  43.5  0.001  Brachybacterium faecium DSM 4810  Bacteria  normal  1  n/a   
 
 
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NC_011886  Achl_1204  succinate dehydrogenase, cytochrome b556 subunit  30.48 
 
 		 126 aa  43.5  0.001  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.000000580451 
 
 
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NC_014151  Cfla_1017  succinate dehydrogenase, cytochrome b556 subunit  33.71 
 
 		 132 aa  42.4  0.002  Cellulomonas flavigena DSM 20109  Bacteria  normal  1  normal  1 
 
 
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NC_013174  Jden_0821  succinate dehydrogenase, cytochrome b556 subunit  33.7 
 
 		 126 aa  42  0.003  Jonesia denitrificans DSM 20603  Bacteria  normal  1  normal  1 
 
 
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NC_013521  Sked_25800  succinate dehydrogenase subunit C  33.7 
 
 		 126 aa  41.6  0.003  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.180508  normal  0.930468 
 
 
-
 
NC_013131  Caci_0772  succinate dehydrogenase, cytochrome b556 subunit  29.21 
 
 		 132 aa  41.2  0.004  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  0.200445 
 
 
-
 
NC_012669  Bcav_2950  succinate dehydrogenase, cytochrome b556 subunit  31.82 
 
 		 142 aa  41.2  0.004  Beutenbergia cavernae DSM 12333  Bacteria  normal  1  hitchhiker  0.000313262 
 
 
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NC_013530  Xcel_0990  succinate dehydrogenase, cytochrome b556 subunit  26.61 
 
 		 126 aa  41.6  0.004  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.051901  n/a   
 
 
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NC_013501  Rmar_0208  succinate dehydrogenase, cytochrome b556 subunit  28.07 
 
 		 136 aa  41.2  0.005  Rhodothermus marinus DSM 4252  Bacteria  normal  1  n/a   
 
 
-
 
NC_008025  Dgeo_0889  succinate dehydrogenase, cytochrome b subunit  27.43 
 
 		 118 aa  40.4  0.008  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.891271  normal  0.65854 
 
 
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