40 homologs were found in PanDaTox collection
for query gene Sked_25800 on replicon NC_013521
Organism: Sanguibacter keddieii DSM 10542



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013521  Sked_25800  succinate dehydrogenase subunit C  100 
 
 		 126 aa  251  2.0000000000000002e-66  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.180508  normal  0.930468 
 
 
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NC_013174  Jden_0821  succinate dehydrogenase, cytochrome b556 subunit  91.27 
 
 		 126 aa  236  1e-61  Jonesia denitrificans DSM 20603  Bacteria  normal  1  normal  1 
 
 
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NC_013530  Xcel_0990  succinate dehydrogenase, cytochrome b556 subunit  86.51 
 
 		 126 aa  222  1e-57  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.051901  n/a   
 
 
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NC_014151  Cfla_1017  succinate dehydrogenase, cytochrome b556 subunit  86.4 
 
 		 132 aa  213  9.999999999999999e-55  Cellulomonas flavigena DSM 20109  Bacteria  normal  1  normal  1 
 
 
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NC_012669  Bcav_2950  succinate dehydrogenase, cytochrome b556 subunit  85.83 
 
 		 142 aa  212  1.9999999999999998e-54  Beutenbergia cavernae DSM 12333  Bacteria  normal  1  hitchhiker  0.000313262 
 
 
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NC_011886  Achl_1204  succinate dehydrogenase, cytochrome b556 subunit  75.4 
 
 		 126 aa  198  3e-50  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.000000580451 
 
 
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NC_008541  Arth_1131  succinate dehydrogenase, cytochrome b subunit  74.6 
 
 		 126 aa  196  1.0000000000000001e-49  Arthrobacter sp. FB24  Bacteria  normal  1  n/a   
 
 
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NC_013172  Bfae_21310  succinate dehydrogenase subunit C  74.19 
 
 		 125 aa  186  1e-46  Brachybacterium faecium DSM 4810  Bacteria  normal  1  n/a   
 
 
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NC_007777  Francci3_0681  succinate dehydrogenase, cytochrome b subunit  66.67 
 
 		 131 aa  178  2.9999999999999997e-44  Frankia sp. CcI3  Bacteria  normal  0.414891  normal  0.0350115 
 
 
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NC_009664  Krad_3952  Succinate dehydrogenase cytochrome b556 subunit  69.17 
 
 		 139 aa  175  2e-43  Kineococcus radiotolerans SRS30216  Bacteria  normal  1  normal  0.013264 
 
 
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NC_013131  Caci_0772  succinate dehydrogenase, cytochrome b556 subunit  66.94 
 
 		 132 aa  174  5e-43  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  0.200445 
 
 
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NC_012803  Mlut_04850  succinate dehydrogenase, cytochrome b556 subunit  65.89 
 
 		 134 aa  168  3e-41  Micrococcus luteus NCTC 2665  Bacteria  normal  1  n/a   
 
 
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NC_008705  Mkms_1247  succinate dehydrogenase, cytochrome b subunit  70.37 
 
 		 142 aa  161  2.0000000000000002e-39  Mycobacterium sp. KMS  Bacteria  normal  0.59332  normal  1 
 
 
-
 
NC_009077  Mjls_1256  succinate dehydrogenase, cytochrome b subunit  70.37 
 
 		 142 aa  161  2.0000000000000002e-39  Mycobacterium sp. JLS  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008146  Mmcs_1230  succinate dehydrogenase, cytochrome b subunit  70.37 
 
 		 142 aa  161  2.0000000000000002e-39  Mycobacterium sp. MCS  Bacteria  normal  0.490436  n/a   
 
 
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NC_013441  Gbro_1778  succinate dehydrogenase, cytochrome b556 subunit  60.16 
 
 		 139 aa  158  2e-38  Gordonia bronchialis DSM 43247  Bacteria  normal  1  n/a   
 
 
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NC_013235  Namu_1311  succinate dehydrogenase, cytochrome b556 subunit  61.24 
 
 		 143 aa  159  2e-38  Nakamurella multipartita DSM 44233  Bacteria  normal  0.454603  normal  1 
 
 
-
 
NC_008726  Mvan_1589  succinate dehydrogenase, cytochrome b subunit  71.29 
 
 		 142 aa  159  2e-38  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.603867  normal  0.335137 
 
 
-
 
NC_009338  Mflv_4844  succinate dehydrogenase, cytochrome b subunit  69.61 
 
 		 142 aa  158  3e-38  Mycobacterium gilvum PYR-GCK  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009565  TBFG_13347  succinate dehydrogenase cytochrome B-556 subunit sdhC  65.42 
 
 		 144 aa  157  4e-38  Mycobacterium tuberculosis F11  Bacteria  normal  1  normal  0.262183 
 
 
-
 
NC_013093  Amir_6462  succinate dehydrogenase, cytochrome b556 subunit  60.98 
 
 		 140 aa  156  8e-38  Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
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NC_013159  Svir_05380  succinate dehydrogenase subunit C  61.4 
 
 		 116 aa  142  1e-33  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.833154  normal  1 
 
 
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NC_014158  Tpau_0967  succinate dehydrogenase, cytochrome b556 subunit  59.48 
 
 		 134 aa  142  2e-33  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.226571  n/a   
 
 
-
 
NC_013525  Tter_0787  succinate dehydrogenase, cytochrome b556 subunit  44.23 
 
 		 119 aa  105  2e-22  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_008025  Dgeo_0889  succinate dehydrogenase, cytochrome b subunit  43.14 
 
 		 118 aa  88.6  3e-17  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.891271  normal  0.65854 
 
 
-
 
NC_013124  Afer_0188  succinate dehydrogenase, cytochrome b556 subunit  36.84 
 
 		 138 aa  85.9  2e-16  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  1  n/a   
 
 
-
 
NC_013501  Rmar_0208  succinate dehydrogenase, cytochrome b556 subunit  37.38 
 
 		 136 aa  75.9  0.0000000000002  Rhodothermus marinus DSM 4252  Bacteria  normal  1  n/a   
 
 
-
 
NC_010831  Cphamn1_2516  succinate dehydrogenase, cytochrome b556 subunit  36.11 
 
 		 154 aa  72.8  0.000000000001  Chlorobium phaeobacteroides BS1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011059  Paes_2257  succinate dehydrogenase, cytochrome b556 subunit  37.35 
 
 		 144 aa  68.6  0.00000000003  Prosthecochloris aestuarii DSM 271  Bacteria  normal  0.0160285  normal  1 
 
 
-
 
NC_014212  Mesil_1435  succinate dehydrogenase, cytochrome b556 subunit  37.96 
 
 		 123 aa  67.8  0.00000000005  Meiothermus silvanus DSM 9946  Bacteria  normal  0.362976  normal  1 
 
 
-
 
NC_013743  Htur_0933  succinate dehydrogenase, cytochrome b556 subunit  37.33 
 
 		 131 aa  56.2  0.0000001  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_013158  Huta_2835  succinate dehydrogenase, cytochrome b556 subunit  37.8 
 
 		 129 aa  53.1  0.000001  Halorhabdus utahensis DSM 12940  Archaea  normal  0.178148  n/a   
 
 
-
 
NC_013922  Nmag_3125  succinate dehydrogenase, cytochrome b556 subunit  33.33 
 
 		 143 aa  48.1  0.00004  Natrialba magadii ATCC 43099  Archaea  normal  1  n/a   
 
 
-
 
NC_013202  Hmuk_2076  succinate dehydrogenase, cytochrome b556 subunit  38.96 
 
 		 131 aa  45.8  0.0002  Halomicrobium mukohataei DSM 12286  Archaea  normal  1  normal  1 
 
 
-
 
NC_009050  Rsph17029_3885  succinate dehydrogenase, cytochrome b subunit  30 
 
 		 114 aa  45.8  0.0002  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  1  normal  0.0570697 
 
 
-
 
NC_007494  RSP_3148  putative succinate dehydrogenase cytochrome b-556 subunit  30 
 
 		 114 aa  45.8  0.0002  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.80265  n/a   
 
 
-
 
NC_002976  SERP0730  succinate dehydrogenase, cytochrome b558 subunit  29.25 
 
 		 204 aa  42.7  0.002  Staphylococcus epidermidis RP62A  Bacteria  normal  0.545164  n/a   
 
 
-
 
NC_009632  SaurJH1_1228  succinate dehydrogenase/fumarate reductase cytochrome b subunit  31.63 
 
 		 204 aa  42  0.003  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009487  SaurJH9_1206  succinate dehydrogenase/fumarate reductase cytochrome b subunit  31.63 
 
 		 204 aa  42  0.003  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  1  n/a   
 
 
-
 
NC_009440  Msed_1113  succinate dehydrogenase, cytochrome b subunit  26.13 
 
 		 133 aa  40.4  0.009  Metallosphaera sedula DSM 5348  Archaea  normal  0.405795  normal  1 
 
 
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