20 homologs were found in PanDaTox collection
for query gene Msed_1113 on replicon NC_009440
Organism: Metallosphaera sedula DSM 5348



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009440  Msed_1113  succinate dehydrogenase, cytochrome b subunit  100 
 
 		 133 aa  263  5.999999999999999e-70  Metallosphaera sedula DSM 5348  Archaea  normal  0.405795  normal  1 
 
 
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NC_010085  Nmar_0259  hypothetical protein  32.65 
 
 		 143 aa  66.6  0.0000000001  Nitrosopumilus maritimus SCM1  Archaea  n/a    normal  0.214305 
 
 
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NC_009073  Pcal_2129  succinate dehydrogenase cytochrome b subunit  32.81 
 
 		 140 aa  62.8  0.000000001  Pyrobaculum calidifontis JCM 11548  Archaea  n/a    normal  1 
 
 
-
 
NC_009376  Pars_2360  hypothetical protein  32.26 
 
 		 142 aa  62  0.000000003  Pyrobaculum arsenaticum DSM 13514  Archaea  normal  1  normal  1 
 
 
-
 
NC_008701  Pisl_0669  hypothetical protein  30.65 
 
 		 159 aa  60.5  0.000000009  Pyrobaculum islandicum DSM 4184  Archaea  normal  0.59864  normal  0.795116 
 
 
-
 
NC_007777  Francci3_0681  succinate dehydrogenase, cytochrome b subunit  28.44 
 
 		 131 aa  48.1  0.00003  Frankia sp. CcI3  Bacteria  normal  0.414891  normal  0.0350115 
 
 
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NC_008698  Tpen_1125  succinate dehydrogenase cytochrome b-556 subunit  29.47 
 
 		 127 aa  45.8  0.0002  Thermofilum pendens Hrk 5  Archaea  normal  0.504546  n/a   
 
 
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NC_009565  TBFG_13347  succinate dehydrogenase cytochrome B-556 subunit sdhC  26.32 
 
 		 144 aa  45.4  0.0002  Mycobacterium tuberculosis F11  Bacteria  normal  1  normal  0.262183 
 
 
-
 
NC_014158  Tpau_0967  succinate dehydrogenase, cytochrome b556 subunit  29.85 
 
 		 134 aa  42.4  0.002  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.226571  n/a   
 
 
-
 
NC_013174  Jden_0821  succinate dehydrogenase, cytochrome b556 subunit  29.82 
 
 		 126 aa  42.4  0.002  Jonesia denitrificans DSM 20603  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009338  Mflv_4844  succinate dehydrogenase, cytochrome b subunit  25.44 
 
 		 142 aa  42.4  0.002  Mycobacterium gilvum PYR-GCK  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008726  Mvan_1589  succinate dehydrogenase, cytochrome b subunit  27.17 
 
 		 142 aa  42.4  0.002  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.603867  normal  0.335137 
 
 
-
 
NC_009077  Mjls_1256  succinate dehydrogenase, cytochrome b subunit  29.85 
 
 		 142 aa  41.2  0.004  Mycobacterium sp. JLS  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008705  Mkms_1247  succinate dehydrogenase, cytochrome b subunit  29.85 
 
 		 142 aa  41.2  0.004  Mycobacterium sp. KMS  Bacteria  normal  0.59332  normal  1 
 
 
-
 
NC_008146  Mmcs_1230  succinate dehydrogenase, cytochrome b subunit  29.85 
 
 		 142 aa  41.2  0.004  Mycobacterium sp. MCS  Bacteria  normal  0.490436  n/a   
 
 
-
 
NC_013158  Huta_2835  succinate dehydrogenase, cytochrome b556 subunit  29.27 
 
 		 129 aa  40.8  0.005  Halorhabdus utahensis DSM 12940  Archaea  normal  0.178148  n/a   
 
 
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NC_013235  Namu_1311  succinate dehydrogenase, cytochrome b556 subunit  31.82 
 
 		 143 aa  40.8  0.006  Nakamurella multipartita DSM 44233  Bacteria  normal  0.454603  normal  1 
 
 
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NC_013521  Sked_25800  succinate dehydrogenase subunit C  26.13 
 
 		 126 aa  40.4  0.009  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.180508  normal  0.930468 
 
 
-
 
NC_012669  Bcav_2950  succinate dehydrogenase, cytochrome b556 subunit  25.89 
 
 		 142 aa  40  0.01  Beutenbergia cavernae DSM 12333  Bacteria  normal  1  hitchhiker  0.000313262 
 
 
-
 
NC_014151  Cfla_1017  succinate dehydrogenase, cytochrome b556 subunit  27.27 
 
 		 132 aa  40  0.01  Cellulomonas flavigena DSM 20109  Bacteria  normal  1  normal  1 
 
 
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