| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gura_3257 |
|---|
| Symbol | |
|---|
| ID | 5166168 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter uraniireducens Rf4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009483 |
|---|
| Strand | - |
|---|
| Start bp | 3829216 |
|---|
| End bp | 3829875 |
|---|
| Gene Length | 660 bp |
|---|
| Protein Length | 219 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 640550747 |
|---|
| Product | succinate dehydrogenase/fumarate reductase cytochrome b subunit |
|---|
| Protein accession | YP_001231991 |
|---|
| Protein GI | 148265285 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR02046] succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.000000103645 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAACTAT TAAAAAGCTC AGTGGGAAGA AAGATCCTTA TGGCCATCAC CGGCCAGCTG
ATGGTTCTTT TCGTAATTGT TCATCTGATT GGTAACTCTT CTATTTTTGT CGGTCCCGAT
GGAATCAATT CCTATGCAGA ACATCTCCAC AGCCTCGGAC CCCTGGTTTG GGTATTCCGC
CTTGCCATGC TGGCCTTTAT TTTGGTCCAT GCCTTTTACG GCATCCAGGT GAGCATCGAA
AACAGTAAGG CGAATCCTTC CAAGTACGCG ATCAACAATA AGCTGAAGGC CAATTTCGCC
AGTGAAAGCA TGATCTGGAC CGGATTGCTC CTTGCACTTT TCGTCATCTA CCACATCAGT
CACTTCACCC TTCGGCTAAC ATCCGACGTT TCCGCCTTTG CAGGCCAGGT GCCGGGCAAC
GTCTTCGGTA TGGTGACCGG GAGTTTCTCT CATGGCATCA TTGCTTCAAC CTATGTGGCG
GCCATGGTGG TCCTCTGCCT ACATCTTTTC CACGGCATCC AGAGTTTCTT CCAGACCATG
GGGTGGAACG GCGATAAAAG TCTGCCGGTG ATCAGTCAGG TGGGGCGGGT ACTTGCCTTT
GTCTTTTTGA TCGGCTACAG CTCCATTCCG GTTTTCATCC TTGCAGGCAT AATCAAATAG
|
|---|
| Protein sequence | MQLLKSSVGR KILMAITGQL MVLFVIVHLI GNSSIFVGPD GINSYAEHLH SLGPLVWVFR
LAMLAFILVH AFYGIQVSIE NSKANPSKYA INNKLKANFA SESMIWTGLL LALFVIYHIS
HFTLRLTSDV SAFAGQVPGN VFGMVTGSFS HGIIASTYVA AMVVLCLHLF HGIQSFFQTM
GWNGDKSLPV ISQVGRVLAF VFLIGYSSIP VFILAGIIK
|
|---|
| |