Gene Rpic12D_1827 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_1827 
Symbol 
ID8019483 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp1945622 
End bp1946032 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content57% 
IMG OID644830611 
Productsuccinate dehydrogenase, cytochrome b556 subunit 
Protein accessionYP_002981781 
Protein GI241663421 
COG category[C] Energy production and conversion 
COG ID[COG2009] Succinate dehydrogenase/fumarate reductase, cytochrome b subunit 
TIGRFAM ID[TIGR02970] succinate dehydrogenase, cytochrome b556 subunit 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.449633 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGAAG CCATCAAGAA AGCCAGGCCG GTATACAGGA ACATCGGTTT GGGCGACATC 
GCCCGCTACC GTTTGCCCTG GGCCGGTAAG GTGTCCATCT TGCACCGTGC CAGCGGTGCG
CTGATGTTCC TTCTTCTTCC GTTCGTGCTG TACTTGTTCG AACAAAGTCT CACGTCGGAA
ATCAGTTTCG CCAAGTTCAC GGCGCTTCTG TCCAACGGTT TTGCCAAGGT CGTCGTCCTC
GCGCTCATCT GGGCCTATCT GCACCATTTC TGCGCCGGCA TCCGTTACCT GATCCTCGAT
CTGCATATCG GTATCGACAA GACCTCGGCT TCCAAGTCAG CTGTGAGCGT GCTCATCGTC
AGCCTGCTGC TGACGGTGGT GTTTGGCGCC AAGCTGTTCG GCCTGTTCTG A
 
Protein sequence
MAEAIKKARP VYRNIGLGDI ARYRLPWAGK VSILHRASGA LMFLLLPFVL YLFEQSLTSE 
ISFAKFTALL SNGFAKVVVL ALIWAYLHHF CAGIRYLILD LHIGIDKTSA SKSAVSVLIV
SLLLTVVFGA KLFGLF