Gene Tbd_1182 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_1182 
Symbol 
ID3671543 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp1242352 
End bp1242732 
Gene Length381 bp 
Protein Length126 aa 
Translation table11 
GC content71% 
IMG OID637709866 
Productsuccinate dehydrogenase subunit C 
Protein accessionYP_314940 
Protein GI74317200 
COG category[C] Energy production and conversion 
COG ID[COG2009] Succinate dehydrogenase/fumarate reductase, cytochrome b subunit 
TIGRFAM ID[TIGR02970] succinate dehydrogenase, cytochrome b556 subunit 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.615812 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGCCCG TCCCGCGCCC CGTTTATCTC GATCTGTTCC GCATCCATCT GCCCCTGCCG 
GGCTGGGTGT CGATCCTGCA CCGGGTGTCG GGCGCGCTGC TGTTTCTCGC GTTGCCGACG
GGCGTATGGC TGCTCTCGGT CTCGCTGTCG GACGAGGCGG GCTACCGGTA CGTCAGCGAG
GTCTTCGCGC ATCCGCTCGC GCGCACCGCC ACGCTGGTGC TGGTCTGGGC CGCGAGCCAT
CACTTCTTCG CCGGGCTGCG CCACCTGGCG CTCGACGTGC ACTGGGGCGA AGACCTCGCG
TCGGCGCGCC GGAGCAGCCT CGCCGTGATG GTCGCGGCGG GGCTCGCGAC GGGCCTCGCC
GCGTGGAGAC TGTTCGGATG A
 
Protein sequence
MKPVPRPVYL DLFRIHLPLP GWVSILHRVS GALLFLALPT GVWLLSVSLS DEAGYRYVSE 
VFAHPLARTA TLVLVWAASH HFFAGLRHLA LDVHWGEDLA SARRSSLAVM VAAGLATGLA
AWRLFG