| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_1880 |
|---|
| Symbol | |
|---|
| ID | 8807653 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. K90mix |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013889 |
|---|
| Strand | - |
|---|
| Start bp | 1995717 |
|---|
| End bp | 1996097 |
|---|
| Gene Length | 381 bp |
|---|
| Protein Length | 126 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | |
|---|
| Product | succinate dehydrogenase, cytochrome b556 subunit |
|---|
| Protein accession | YP_003461107 |
|---|
| Protein GI | 289209041 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.082633 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 48 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTTCTC CGGCACGGCC CGTTTTCCTG GATCTGCGCA AGATCCGCCT TCCGCTGAAT
GCCGTGGTTT CCATCCTGCA CCGTATTACC GGGATCTTTC TGATCCTGTC GATCCCCGTC
TTGTTGTGGC TGCTCGACCG CTCGCTGGCC AGTCCCGAGG GGTTCGCTCA GGTGGCGGCC
ATCATCGGTC ACCCGGTCGG GCTGGCGCTG CTGCTGATCG GGCTGTGGTG GCTGTTGCAC
CACCTGTTCG CCGGGATTCG CTTTCTGCTG ATGGAGTTCG GCATCGGGGA GGATCGGGCC
GGCTCGCTGC GCACCGCCCG CGATGCCCTG TATGCCGCGA TCTTCGCCAC GCTTGCCGTC
TGGCTGGGGC TGATCCTGTG A
|
|---|
| Protein sequence | MSSPARPVFL DLRKIRLPLN AVVSILHRIT GIFLILSIPV LLWLLDRSLA SPEGFAQVAA
IIGHPVGLAL LLIGLWWLLH HLFAGIRFLL MEFGIGEDRA GSLRTARDAL YAAIFATLAV
WLGLIL
|
|---|
| |