8 homologs were found in PanDaTox collection
for query gene Mnod_8671 on replicon NC_011892
Organism: Methylobacterium nodulans ORS 2060



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011892  Mnod_8671  succinate dehydrogenase, cytochrome b subunit  100 
 
 
115 aa  226  8e-59  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_007494  RSP_3148  putative succinate dehydrogenase cytochrome b-556 subunit  49.09 
 
 
114 aa  99  2e-20  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.80265  n/a   
 
 
-
 
NC_009050  Rsph17029_3885  succinate dehydrogenase, cytochrome b subunit  49.09 
 
 
114 aa  99  2e-20  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal  0.0570697 
 
 
-
 
NC_007802  Jann_3968  succinate dehydrogenase subunit C  44.25 
 
 
114 aa  89.7  1e-17  Jannaschia sp. CCS1  Bacteria  normal  normal  0.617218 
 
 
-
 
NC_010510  Mrad2831_5987  succinate dehydrogenase cytochrome b subunit  46.79 
 
 
125 aa  83.6  0.000000000000001  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.340501  normal  0.95264 
 
 
-
 
NC_012792  Vapar_5616  succinate dehydrogenase, cytochrome b subunit  44.14 
 
 
114 aa  57.8  0.00000005  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_008786  Veis_2513  succinate dehydrogenase, cytochrome b subunit  45.45 
 
 
116 aa  57  0.00000008  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.159074  normal 
 
 
-
 
NC_011059  Paes_2257  succinate dehydrogenase, cytochrome b556 subunit  29.49 
 
 
144 aa  41.2  0.004  Prosthecochloris aestuarii DSM 271  Bacteria  normal  0.0160285  normal 
 
 
-
 
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