18 homologs were found in PanDaTox collection
for query gene Vapar_5616 on replicon NC_012792
Organism: Variovorax paradoxus S110



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_012792  Vapar_5616  succinate dehydrogenase, cytochrome b subunit  100 
 
 		 114 aa  221  3e-57  Variovorax paradoxus S110  Bacteria  normal  1  n/a   
 
 
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NC_008786  Veis_2513  succinate dehydrogenase, cytochrome b subunit  71.72 
 
 		 116 aa  131  3.9999999999999996e-30  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.159074  normal  1 
 
 
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NC_007802  Jann_3968  succinate dehydrogenase subunit C  52.33 
 
 		 114 aa  87.4  5e-17  Jannaschia sp. CCS1  Bacteria  normal  1  normal  0.617218 
 
 
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NC_009050  Rsph17029_3885  succinate dehydrogenase, cytochrome b subunit  56.32 
 
 		 114 aa  86.3  1e-16  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  1  normal  0.0570697 
 
 
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NC_007494  RSP_3148  putative succinate dehydrogenase cytochrome b-556 subunit  56.32 
 
 		 114 aa  86.3  1e-16  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.80265  n/a   
 
 
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NC_010510  Mrad2831_5987  succinate dehydrogenase cytochrome b subunit  49.02 
 
 		 125 aa  76.6  0.0000000000001  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.340501  normal  0.95264 
 
 
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NC_011892  Mnod_8671  succinate dehydrogenase, cytochrome b subunit  44.57 
 
 		 115 aa  63.5  0.0000000009  Methylobacterium nodulans ORS 2060  Bacteria  normal  1  n/a   
 
 
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NC_011886  Achl_1204  succinate dehydrogenase, cytochrome b556 subunit  29.03 
 
 		 126 aa  46.2  0.0001  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.000000580451 
 
 
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NC_011059  Paes_2257  succinate dehydrogenase, cytochrome b556 subunit  34.25 
 
 		 144 aa  46.6  0.0001  Prosthecochloris aestuarii DSM 271  Bacteria  normal  0.0160285  normal  1 
 
 
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NC_008541  Arth_1131  succinate dehydrogenase, cytochrome b subunit  29.03 
 
 		 126 aa  46.6  0.0001  Arthrobacter sp. FB24  Bacteria  normal  1  n/a   
 
 
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NC_014151  Cfla_1017  succinate dehydrogenase, cytochrome b556 subunit  37.5 
 
 		 132 aa  45.4  0.0002  Cellulomonas flavigena DSM 20109  Bacteria  normal  1  normal  1 
 
 
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NC_013174  Jden_0821  succinate dehydrogenase, cytochrome b556 subunit  29.25 
 
 		 126 aa  44.3  0.0005  Jonesia denitrificans DSM 20603  Bacteria  normal  1  normal  1 
 
 
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NC_009727  CBUD_0590  succinate dehydrogenase cytochrome b556 subunit  31.43 
 
 		 165 aa  42.7  0.002  Coxiella burnetii Dugway 5J108-111  Bacteria  normal  0.1163  n/a   
 
 
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NC_012803  Mlut_04850  succinate dehydrogenase, cytochrome b556 subunit  28.7 
 
 		 134 aa  42.4  0.002  Micrococcus luteus NCTC 2665  Bacteria  normal  1  n/a   
 
 
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NC_010117  COXBURSA331_A1563  succinate dehydrogenase, cytochrome b556 subunit  31.43 
 
 		 125 aa  42  0.003  Coxiella burnetii RSA 331  Bacteria  normal  0.503767  n/a   
 
 
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NC_012669  Bcav_2950  succinate dehydrogenase, cytochrome b556 subunit  29.25 
 
 		 142 aa  42  0.003  Beutenbergia cavernae DSM 12333  Bacteria  normal  1  hitchhiker  0.000313262 
 
 
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NC_013521  Sked_25800  succinate dehydrogenase subunit C  27.88 
 
 		 126 aa  42  0.003  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.180508  normal  0.930468 
 
 
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NC_013441  Gbro_1778  succinate dehydrogenase, cytochrome b556 subunit  30.59 
 
 		 139 aa  41.2  0.005  Gordonia bronchialis DSM 43247  Bacteria  normal  1  n/a   
 
 
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