| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1996 |
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| Symbol | sdhC |
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| ID | 1220836 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 2172967 |
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| End bp | 2173389 |
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| Gene Length | 423 bp |
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| Protein Length | 140 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637238390 |
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| Product | putative transmembrane succinate dehydrogenase (cytochrome B-556 subunit) oxidoreductase protein |
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| Protein accession | NP_520117 |
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| Protein GI | 17546715 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2009] Succinate dehydrogenase/fumarate reductase, cytochrome b subunit |
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| TIGRFAM ID | [TIGR02970] succinate dehydrogenase, cytochrome b556 subunit |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.252521 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.595481 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGGGTCTG ACATGGCAGA AGCCATCAAG AAAGCCAGGC CGGAATTCAG GAACATCGGT
CTGGGGGATA TCGCCCGCTA CCGGTTGCCC TGGGCCGGCA AGGTGTCCAT CCTGCATCGC
GCCAGCGGTG CGCTGATGTT CCTTCTTCTT CCGTTCGTGC TGTACCTGTT CGAGCAGAGT
CTCACGTCGG AAATCAGTTT CGCCAAGTTC ACGGCGCTTC TGTCCAACGG CTTCGCCAAG
GTTGTCGTCC TCGCGCTCAT CTGGGCCTAC CTGCACCACT TCTGCGCCGG CATCCGCTAC
CTGATCCTCG ACCTGCACAT CGGCATCGAC AAGACCACGT CGTCCAAGTC GGCCGTGAGC
GTGCTGATCG TCAGCCTGCT GCTGACCGTC GTGTTCGGCG CCAAGCTGTT CGGCCTGTTC
TGA
|
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| Protein sequence | MGSDMAEAIK KARPEFRNIG LGDIARYRLP WAGKVSILHR ASGALMFLLL PFVLYLFEQS
LTSEISFAKF TALLSNGFAK VVVLALIWAY LHHFCAGIRY LILDLHIGID KTTSSKSAVS
VLIVSLLLTV VFGAKLFGLF
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