More than 300 homologs were found in PanDaTox collection
for query gene Mpop_0478 on replicon NC_010725
Organism: Methylobacterium populi BJ001



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010725  Mpop_0478  binding-protein-dependent transport systems inner membrane component  100 
 
 
238 aa  423  1e-117  Methylobacterium populi BJ001  Bacteria  normal  0.784725  normal 
 
 
-
 
NC_011757  Mchl_0443  binding-protein-dependent transport systems inner membrane component  82.2 
 
 
242 aa  283  1.0000000000000001e-75  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.508898 
 
 
-
 
NC_010172  Mext_0410  binding-protein-dependent transport systems inner membrane component  83.8 
 
 
242 aa  274  8e-73  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.613258 
 
 
-
 
NC_010498  EcSMS35_0916  quaternary amine ABC transporter permease  38.22 
 
 
243 aa  127  2.0000000000000002e-28  Escherichia coli SMS-3-5  Bacteria  normal  normal  0.636939 
 
 
-
 
CP001509  ECD_02058  predicted transporter subunit: membrane component of ABC superfamily  38.22 
 
 
243 aa  126  3e-28  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
NC_009708  YpsIP31758_2783  quaternary amine ABC transporter permease  36.87 
 
 
278 aa  126  3e-28  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_011353  ECH74115_3253  ABC transporter, quaternary amine uptake (QAT) family, permease protein  38.22 
 
 
243 aa  126  3e-28  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  hitchhiker  0.000564908 
 
 
-
 
NC_012892  B21_02016  hypothetical protein  38.22 
 
 
243 aa  126  3e-28  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_010658  SbBS512_E0845  ABC transporter, quaternary amine uptake (QAT) family, permease protein  38.22 
 
 
243 aa  126  3e-28  Shigella boydii CDC 3083-94  Bacteria  normal  n/a   
 
 
-
 
NC_009800  EcHS_A2263  quaternary amine ABC transporter permease  38.22 
 
 
243 aa  126  3e-28  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_009801  EcE24377A_2416  quaternary amine ABC transporter permease  38.22 
 
 
243 aa  126  3e-28  Escherichia coli E24377A  Bacteria  normal  n/a   
 
 
-
 
NC_010465  YPK_2862  binding-protein-dependent transport systems inner membrane component  36.87 
 
 
278 aa  126  3e-28  Yersinia pseudotuberculosis YPIII  Bacteria  normal  0.01956  n/a   
 
 
-
 
NC_010468  EcolC_1519  binding-protein-dependent transport systems inner membrane component  38.22 
 
 
243 aa  126  3e-28  Escherichia coli ATCC 8739  Bacteria  normal  normal 
 
 
-
 
CP001637  EcDH1_1529  binding-protein-dependent transport systems inner membrane component  37.7 
 
 
243 aa  125  7e-28  Escherichia coli DH1  Bacteria  normal  n/a   
 
 
-
 
NC_009832  Spro_1448  binding-protein-dependent transport systems inner membrane component  37.5 
 
 
260 aa  124  1e-27  Serratia proteamaculans 568  Bacteria  normal  0.320512  normal 
 
 
-
 
NC_011080  SNSL254_A2351  inner membrane ABC transporter permease protein YehW  37.75 
 
 
243 aa  121  9e-27  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal 
 
 
-
 
NC_011205  SeD_A2508  inner membrane ABC transporter permease YehW  37.75 
 
 
243 aa  121  9e-27  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  0.938307  normal 
 
 
-
 
NC_011083  SeHA_C2396  inner membrane ABC transporter permease YehW  37.75 
 
 
243 aa  121  9e-27  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal 
 
 
-
 
NC_011149  SeAg_B2307  inner membrane ABC transporter permease protein YehW  37.75 
 
 
243 aa  120  9.999999999999999e-27  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_011094  SeSA_A2400  inner membrane ABC transporter permease YehW  37.25 
 
 
243 aa  120  1.9999999999999998e-26  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.887466  normal 
 
 
-
 
NC_007963  Csal_2946  binding-protein-dependent transport systems inner membrane component  37.93 
 
 
255 aa  120  3e-26  Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.0159646  n/a   
 
 
-
 
NC_009436  Ent638_2727  binding-protein-dependent transport systems inner membrane component  36.79 
 
 
245 aa  119  6e-26  Enterobacter sp. 638  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_0019  binding-protein-dependent transport systems inner membrane component  58.82 
 
 
247 aa  108  6e-23  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.305196  n/a   
 
 
-
 
NC_009667  Oant_0296  binding-protein-dependent transport systems inner membrane component  36.81 
 
 
248 aa  105  6e-22  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_007948  Bpro_3623  binding-protein-dependent transport systems inner membrane component  36.41 
 
 
252 aa  104  1e-21  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_010511  M446_0016  binding-protein-dependent transport systems inner membrane component  58.82 
 
 
244 aa  102  5e-21  Methylobacterium sp. 4-46  Bacteria  normal  0.0719758  normal  0.0648485 
 
 
-
 
NC_010086  Bmul_3510  binding-protein-dependent transport systems inner membrane component  37.57 
 
 
263 aa  102  6e-21  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_011369  Rleg2_0142  binding-protein-dependent transport systems inner membrane component  36.87 
 
 
249 aa  101  9e-21  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.0957565 
 
 
-
 
NC_009505  BOV_0213  ABC transporter, permease protein  35.71 
 
 
248 aa  101  1e-20  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_004310  BR0222  ABC transporter, permease protein  35.71 
 
 
248 aa  101  1e-20  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_1857  binding-protein-dependent transport systems inner membrane component  37.75 
 
 
256 aa  101  1e-20  Rhodoferax ferrireducens T118  Bacteria  normal  0.930718  n/a   
 
 
-
 
NC_009620  Smed_4640  binding-protein-dependent transport systems inner membrane component  38.42 
 
 
246 aa  100  1e-20  Sinorhizobium medicae WSM419  Bacteria  normal  0.0951209  normal  0.118631 
 
 
-
 
NC_007484  Noc_0540  ABC transporter inner membrane/substrate-binding proteins  35.12 
 
 
501 aa  100  2e-20  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_010505  Mrad2831_4887  binding-protein-dependent transport systems inner membrane component  39.71 
 
 
247 aa  100  2e-20  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.659147  hitchhiker  0.00742235 
 
 
-
 
NC_007511  Bcep18194_B0496  ABC proline/glycine betaine transporter, inner membrane subunit  36.46 
 
 
255 aa  99.8  3e-20  Burkholderia sp. 383  Bacteria  normal  0.792199  normal 
 
 
-
 
NC_010552  BamMC406_5062  binding-protein-dependent transport systems inner membrane component  37.04 
 
 
255 aa  99.4  4e-20  Burkholderia ambifaria MC40-6  Bacteria  normal  0.646466  normal 
 
 
-
 
NC_008391  Bamb_4538  binding-protein-dependent transport systems inner membrane component  36.51 
 
 
255 aa  99  6e-20  Burkholderia ambifaria AMMD  Bacteria  normal  0.52595  normal 
 
 
-
 
NC_012850  Rleg_0148  binding-protein-dependent transport systems inner membrane component  37.24 
 
 
249 aa  98.6  7e-20  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_010515  Bcenmc03_5138  binding-protein-dependent transport systems inner membrane component  36.46 
 
 
255 aa  99  7e-20  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.316717  normal 
 
 
-
 
NC_008061  Bcen_3223  binding-protein-dependent transport systems inner membrane component  36.46 
 
 
255 aa  98.6  7e-20  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.362528  n/a   
 
 
-
 
NC_008543  Bcen2424_5144  binding-protein-dependent transport systems inner membrane component  36.46 
 
 
255 aa  98.6  7e-20  Burkholderia cenocepacia HI2424  Bacteria  normal  0.0793163  normal 
 
 
-
 
NC_009439  Pmen_3118  binding-protein-dependent transport systems inner membrane component  38.82 
 
 
242 aa  98.2  9e-20  Pseudomonas mendocina ymp  Bacteria  normal  0.0982336  normal  0.0324011 
 
 
-
 
NC_008785  BMASAVP1_A1581  amine ABC transporter, permease protein  37.89 
 
 
272 aa  96.3  4e-19  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_008836  BMA10229_A0240  amine ABC transporter, permease protein  37.89 
 
 
272 aa  96.3  4e-19  Burkholderia mallei NCTC 10229  Bacteria  normal  0.56038  n/a   
 
 
-
 
NC_009074  BURPS668_1973  amine ABC transporter, permease protein  37.89 
 
 
272 aa  96.3  4e-19  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_2131  ABC transporter, permease protein  37.89 
 
 
272 aa  96.3  4e-19  Burkholderia pseudomallei 1710b  Bacteria  normal  0.397658  n/a   
 
 
-
 
NC_009080  BMA10247_0919  amine ABC transporter, permease protein  37.89 
 
 
272 aa  96.3  4e-19  Burkholderia mallei NCTC 10247  Bacteria  normal  0.985115  n/a   
 
 
-
 
NC_009076  BURPS1106A_1992  amine ABC transporter, permease protein  37.89 
 
 
272 aa  96.3  4e-19  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_007651  BTH_I2381  ABC transporter, permease protein  37.58 
 
 
278 aa  96.3  4e-19  Burkholderia thailandensis E264  Bacteria  normal  0.540058  n/a   
 
 
-
 
NC_008347  Mmar10_1070  substrate-binding region of ABC-type glycine betaine transport system  40.54 
 
 
525 aa  95.9  5e-19  Maricaulis maris MCS10  Bacteria  normal  0.019749  normal 
 
 
-
 
NC_006348  BMA1141  ABC transporter, permease protein  37.89 
 
 
246 aa  95.5  6e-19  Burkholderia mallei ATCC 23344  Bacteria  normal  0.0821486  n/a   
 
 
-
 
NC_011666  Msil_2136  binding-protein-dependent transport systems inner membrane component  37.56 
 
 
248 aa  94.4  2e-18  Methylocella silvestris BL2  Bacteria  n/a    normal  0.961929 
 
 
-
 
NC_011891  A2cp1_3373  Substrate-binding region of ABC-type glycine betaine transport system  36.87 
 
 
489 aa  92  8e-18  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_3299  Substrate-binding region of ABC-type glycine betaine transport system  37.25 
 
 
490 aa  90.1  3e-17  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_013223  Dret_0769  binding-protein-dependent transport systems inner membrane component  31.75 
 
 
245 aa  89  6e-17  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_013440  Hoch_5205  Substrate-binding region of ABC-type glycine betaine transport system  34.9 
 
 
537 aa  88.2  1e-16  Haliangium ochraceum DSM 14365  Bacteria  normal  0.057164  normal 
 
 
-
 
NC_014212  Mesil_0910  binding-protein-dependent transport systems inner membrane component  40.34 
 
 
249 aa  87.4  2e-16  Meiothermus silvanus DSM 9946  Bacteria  normal  0.646998  normal  0.0333607 
 
 
-
 
NC_008025  Dgeo_0171  binding-protein-dependent transport systems inner membrane component  40.24 
 
 
249 aa  86.3  4e-16  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.867808  normal  0.218955 
 
 
-
 
NC_010117  COXBURSA331_A0267  quaternary amine ABC transporter periplasmic substrate-binding protein  34.29 
 
 
526 aa  85.9  5e-16  Coxiella burnetii RSA 331  Bacteria  normal  n/a   
 
 
-
 
NC_007643  Rru_A2382  binding-protein dependent transport system inner membrane protein  32.35 
 
 
260 aa  85.1  8e-16  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.813569  n/a   
 
 
-
 
NC_010682  Rpic_2784  Substrate-binding region of ABC-type glycine betaine transport system  33.78 
 
 
504 aa  84  0.000000000000002  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_007952  Bxe_B2995  glycine betaine/choline/proline ABC transporter inner membrane protein  33.52 
 
 
238 aa  83.2  0.000000000000003  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_013730  Slin_0317  binding-protein-dependent transport systems inner membrane component  34 
 
 
519 aa  83.2  0.000000000000004  Spirosoma linguale DSM 74  Bacteria  normal  normal  0.417886 
 
 
-
 
NC_013745  Htur_4755  binding-protein-dependent transport systems inner membrane component  31.49 
 
 
224 aa  82.8  0.000000000000004  Haloterrigena turkmenica DSM 5511  Archaea  normal  n/a   
 
 
-
 
NC_010003  Pmob_1127  binding-protein-dependent transport systems inner membrane component  30.69 
 
 
216 aa  82.8  0.000000000000004  Petrotoga mobilis SJ95  Bacteria  normal  0.721959  n/a   
 
 
-
 
NC_007644  Moth_1686  binding-protein dependent transport system inner membrane protein  32.62 
 
 
207 aa  82.8  0.000000000000005  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.038351  normal  0.407571 
 
 
-
 
NC_012856  Rpic12D_2379  Substrate-binding region of ABC-type glycine betaine transport system  32.44 
 
 
518 aa  82.4  0.000000000000005  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_010718  Nther_0120  binding-protein-dependent transport systems inner membrane component  31.87 
 
 
281 aa  82.4  0.000000000000006  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  normal 
 
 
-
 
NC_009727  CBUD_1923  glycine betaine transport system permease protein  33.14 
 
 
526 aa  81.6  0.00000000000001  Coxiella burnetii Dugway 5J108-111  Bacteria  normal  n/a   
 
 
-
 
NC_011083  SeHA_C1664  binding-protein-dependent transport systems inner membrane component  30.05 
 
 
236 aa  80.1  0.00000000000002  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal 
 
 
-
 
NC_011149  SeAg_B1678  binding-protein-dependent transport systems inner membrane component  30.05 
 
 
236 aa  80.1  0.00000000000002  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  0.122529  n/a   
 
 
-
 
NC_009621  Smed_5104  binding-protein-dependent transport systems inner membrane component  31.88 
 
 
251 aa  80.9  0.00000000000002  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.245299 
 
 
-
 
NC_011205  SeD_A1845  binding-protein-dependent transport systems inner membrane component  30.05 
 
 
236 aa  80.1  0.00000000000002  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  0.309897  normal 
 
 
-
 
NC_011080  SNSL254_A1605  binding-protein-dependent transport systems inner membrane component  30.05 
 
 
236 aa  80.1  0.00000000000002  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal 
 
 
-
 
NC_007963  Csal_2353  binding-protein-dependent transport systems inner membrane component  30.89 
 
 
220 aa  80.5  0.00000000000002  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_011094  SeSA_A1596  binding-protein-dependent transport systems inner membrane component  30.05 
 
 
236 aa  80.1  0.00000000000002  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.82645  normal  0.733145 
 
 
-
 
NC_007509  Bcep18194_C7550  ABC glycinebetaine/carnitine/choline transporter, inner membrane subunit  31.77 
 
 
238 aa  80.1  0.00000000000003  Burkholderia sp. 383  Bacteria  normal  0.93042  normal  0.508329 
 
 
-
 
NC_012793  GWCH70_0296  binding-protein-dependent transport systems inner membrane component  31.72 
 
 
211 aa  79.7  0.00000000000003  Geobacillus sp. WCH70  Bacteria  normal  0.4946  n/a   
 
 
-
 
NC_009656  PSPA7_1218  ABC transporter permease  33.12 
 
 
240 aa  80.1  0.00000000000003  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_013457  VEA_001529  probable inner-membrane permease  31.79 
 
 
199 aa  79.3  0.00000000000004  Vibrio sp. Ex25  Bacteria  normal  0.90895  n/a   
 
 
-
 
NC_008786  Veis_2912  binding-protein-dependent transport systems inner membrane component  33.66 
 
 
250 aa  79.3  0.00000000000004  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal  0.105441 
 
 
-
 
NC_009380  Strop_1634  binding-protein-dependent transport systems inner membrane component  33.76 
 
 
261 aa  78.6  0.00000000000008  Salinispora tropica CNB-440  Bacteria  normal  0.649793  normal  0.788807 
 
 
-
 
NC_009953  Sare_1621  binding-protein-dependent transport systems inner membrane component  33.85 
 
 
261 aa  78.2  0.0000000000001  Salinispora arenicola CNS-205  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_3337  substrate-binding region of ABC-type glycine betaine transport system  42.31 
 
 
519 aa  77.8  0.0000000000001  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.917916  normal  0.224892 
 
 
-
 
NC_008688  Pden_4885  binding-protein-dependent transport systems inner membrane component  32.31 
 
 
216 aa  78.2  0.0000000000001  Paracoccus denitrificans PD1222  Bacteria  normal  normal  0.694048 
 
 
-
 
NC_008463  PA14_13610  ABC transporter permease  32.48 
 
 
240 aa  78.2  0.0000000000001  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_013411  GYMC61_1174  binding-protein-dependent transport systems inner membrane component  32.78 
 
 
209 aa  77.8  0.0000000000001  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_002947  PP_0871  binding-protein-dependent transport systems inner membrane component  32.74 
 
 
247 aa  77  0.0000000000002  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_007347  Reut_A1451  binding-protein dependent transport system inner membrane protein  33.73 
 
 
493 aa  77  0.0000000000002  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007973  Rmet_1598  substrate-binding region of ABC-type glycine betaine transport system  30.95 
 
 
516 aa  77.4  0.0000000000002  Cupriavidus metallidurans CH34  Bacteria  normal  0.144217  normal 
 
 
-
 
NC_010001  Cphy_0119  substrate-binding region of ABC-type glycine betaine transport system  28.82 
 
 
523 aa  76.6  0.0000000000003  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.000124345  n/a   
 
 
-
 
NC_009436  Ent638_1924  binding-protein-dependent transport systems inner membrane component  30 
 
 
245 aa  76.6  0.0000000000003  Enterobacter sp. 638  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_0901  binding-protein-dependent transport systems inner membrane component  32.74 
 
 
237 aa  76.6  0.0000000000003  Pseudomonas putida F1  Bacteria  normal  normal  0.229309 
 
 
-
 
NC_010512  Bcenmc03_6581  binding-protein-dependent transport systems inner membrane component  30.73 
 
 
238 aa  76.6  0.0000000000003  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.191415  normal  0.0371863 
 
 
-
 
NC_009675  Anae109_3056  substrate-binding region of ABC-type glycine betaine transport system  37.93 
 
 
496 aa  76.3  0.0000000000004  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal  0.611617 
 
 
-
 
NC_007492  Pfl01_0806  binding-protein dependent transport system inner membrane protein  32.91 
 
 
238 aa  76.6  0.0000000000004  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.674901 
 
 
-
 
NC_008062  Bcen_5735  binding-protein-dependent transport systems inner membrane component  30.73 
 
 
238 aa  76.3  0.0000000000004  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.224143  n/a   
 
 
-
 
NC_010322  PputGB1_0915  binding-protein-dependent transport systems inner membrane component  32.14 
 
 
237 aa  76.3  0.0000000000004  Pseudomonas putida GB-1  Bacteria  normal  0.144284  normal  0.229592 
 
 
-
 
NC_008544  Bcen2424_6099  binding-protein-dependent transport systems inner membrane component  30.73 
 
 
238 aa  76.3  0.0000000000004  Burkholderia cenocepacia HI2424  Bacteria  normal  0.840273  normal 
 
 
-
 
NC_010320  Teth514_1202  binding-protein-dependent transport systems inner membrane component  32.43 
 
 
212 aa  75.9  0.0000000000005  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
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