| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_0916 |
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| Symbol | |
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| ID | 6143503 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 924245 |
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| End bp | 924976 |
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| Gene Length | 732 bp |
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| Protein Length | 243 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 641615804 |
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| Product | quaternary amine ABC transporter permease |
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| Protein accession | YP_001742996 |
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| Protein GI | 170680189 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1174] ABC-type proline/glycine betaine transport systems, permease component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 0.636939 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAGATGT TGCGCGATCC GCTGTTCTGG CTCATTGCTT TGTTTGTGGC ACTGATTTTC
TGGCTGCCTT ACAGCCAGCC GCTGTTTGCT GCCTTGTTCC CACAACTGCC ACGCCCCGTT
TATCAGCAAG AAAGTTTTGC AGCTCTGGCA CTGGCTCATT TCTGGCTGGT GGGAATTTCG
AGTTTGTTTG CGGTGATCAT TGGCACTGGT GCAGGAATTA TTGTTACTCG CCCGTGGGGC
GCGGAATTTC GCCCACTGGT GGAAACTATT GCCGCCGTTG GGCAGACTTT TCCGCCCGTC
GCGGTGCTGG CGATTGCCGT TCCGGTGATC GGCTTTGGTC TGCAACCCGC GATTATCGCC
TTGATCCTTT ACGGCGTGCT GCCCGTCCTG CAGGCGACAC TTGCCGGGCT GGGAGCGATT
GATGCCAGCG TGACAGAAGT TGCGAAAGGT ATGGGAATGA GTCGTGGTCA GCGACTGCGT
AAGGTCGAGC TACCGCTGGC GGCTCCGGTG ATTCTGGCGG GCGTGCGAAC TTCGGTGATT
ATCAACATTG GTACGGCGAC GATCGCCTCA ACGGTAGGGG CCAGCACGCT GGGTATGCCG
ATCATCATCG GGCTTAGCGG ATTTAATACC GCGTATGTGA TCCAGGGGGC GTTACTGGTG
GCACTGGCGG CGATCATCGC AGACCGCCTG TTTGAAAGGC TGGTGCAGGC GTTCAGCCAG
CACGCAAAAT AA
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| Protein sequence | MKMLRDPLFW LIALFVALIF WLPYSQPLFA ALFPQLPRPV YQQESFAALA LAHFWLVGIS
SLFAVIIGTG AGIIVTRPWG AEFRPLVETI AAVGQTFPPV AVLAIAVPVI GFGLQPAIIA
LILYGVLPVL QATLAGLGAI DASVTEVAKG MGMSRGQRLR KVELPLAAPV ILAGVRTSVI
INIGTATIAS TVGASTLGMP IIIGLSGFNT AYVIQGALLV ALAAIIADRL FERLVQAFSQ
HAK
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