| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_0901 |
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| Symbol | |
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| ID | 5193425 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 1025365 |
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| End bp | 1026078 |
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| Gene Length | 714 bp |
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| Protein Length | 237 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640585360 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001266247 |
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| Protein GI | 148546145 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1174] ABC-type proline/glycine betaine transport systems, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.229309 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCTAAAC GCTACGGAAA GGGGCTGTTG GGATGGGCCG CCGTGCTCGT CATCCTGGCC
CTGCTGGTCC ACTGGATCGG CATCGACACG ATCGCGCGTT ATCGCGACGA TCTTGGGTTC
TACCTGCAAG CGCACCTGGT ATTGGTGCTG GCTTCGATGG CGGCGGCGCT GGCCGTGGGC
ATCCCCGCCG GCATTGCGTT AAGTCGACCG CACCGGGTCG ACAAAGCCGA GCGTTTCATG
CAGTTCTTCA ACGTTGGCAA CACCATCCCC CCTCTGGCCG TTCTGGCCAT CGCCCTGAGT
ATCCTGGGCA TCGGCGCCGG GCCTGCGATC TTCGCACTGT TCCTCGCGTC CCTCCTGCCC
ATCGTGCGCA ACACCTACGA AGGCCTGAAA AACGTCCCCG CATCGCTCAA GGAAGCCGCT
ACCGGCATTG GCATGACCCC GCGCCAGCAA CTCTGGCAGG TGGAACTGCC CAACGCCGTG
CCGATCATCG TCGGCGGCGT ACGCGTGGCC CTGGCGCTGA ACGTGGGCAC CGCACCGCTG
GCATTCCTGA TCGGCGCCAA CAGCCTGGGC AGCCTGATCT TCCCCGGCAT CGCCCTGAAC
AACCAGCCGC AGCTGCTGCT GGGTGCCGCC TGCACCGCGC TGCTGGCACT GGTGCTGGAC
GCGGCGGTGA GTTTCTCCAG CAGGCGCTGG CTGGAACGTG GCCTGGCCCA ATAA
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| Protein sequence | MAKRYGKGLL GWAAVLVILA LLVHWIGIDT IARYRDDLGF YLQAHLVLVL ASMAAALAVG
IPAGIALSRP HRVDKAERFM QFFNVGNTIP PLAVLAIALS ILGIGAGPAI FALFLASLLP
IVRNTYEGLK NVPASLKEAA TGIGMTPRQQ LWQVELPNAV PIIVGGVRVA LALNVGTAPL
AFLIGANSLG SLIFPGIALN NQPQLLLGAA CTALLALVLD AAVSFSSRRW LERGLAQ
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