Gene Mext_0410 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_0410 
Symbol 
ID5834822 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp453052 
End bp453780 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content72% 
IMG OID641366194 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001637903 
Protein GI163849860 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1174] ABC-type proline/glycine betaine transport systems, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value0.613258 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCGCG TCTCTGAGGC CCTCGGACCG CTCGCGCTCG GCCTAGCGCT GGCCGGCGCA 
AGCCATCCGG CCTTTGCCGG TCTGATCGGC GCAAGCGGCC GACCCCTGAC CGTCGGCCAC
ATGGCGGAAC TGGCGCTGAA CCACCTCACC TTGGCCGCGA CCGGGCTCAC CCTGGTCGCC
GCACTCGGAA TCGGGCTCGG CCTGATCGCC ACGCGGGCGC GCTTCGCGGG GTTTCGAACC
AGCATCGACA CGCTTGCCGC CTTCGCCCAG GCGGTGCCGC CGGTGGTCGT CGTGGCCCTG
GCCCTGCCGG TGCTCGGCTT CGGCGGGCCG CCGACCCTGC TGGCGCTGAC CGCCTACGGC
ATCATGCCGA CCCTGCGCGG CACGGTCGGA GCACTCGACG CCGTGACCGC GGAGGCCCGC
GAGTCAGCCC TAGCCATCGG GCTGACGCCG GCGCAGATCC TCATGCACAT CGAATTGCCG
CTCGCCGCTG CGGGCCTCGT GGATACCTTG CGCACCGCCC TGATCCTCGC CGCCTCCGTC
ACCGCCGTCG GCGCGCTTGC AGGAGCCTCG ACGCTGGGCA CGCCGATCGT CGCCGGGCTC
CAGAACCAGA ACATCGCGGC GATGCTCCAG GGCGCGCTTG CGACCGCGGC GCTGGCCTTC
CTCGGCGATG CGCTGTTGCT TGCGATCGGT GCCAGGCTAC GTCCGCCCGA AGGACGGACG
GCCGGCTGA
 
Protein sequence
MNRVSEALGP LALGLALAGA SHPAFAGLIG ASGRPLTVGH MAELALNHLT LAATGLTLVA 
ALGIGLGLIA TRARFAGFRT SIDTLAAFAQ AVPPVVVVAL ALPVLGFGGP PTLLALTAYG
IMPTLRGTVG ALDAVTAEAR ESALAIGLTP AQILMHIELP LAAAGLVDTL RTALILAASV
TAVGALAGAS TLGTPIVAGL QNQNIAAMLQ GALATAALAF LGDALLLAIG ARLRPPEGRT
AG