| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_1857 |
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| Symbol | |
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| ID | 3960831 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 1998597 |
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| End bp | 1999367 |
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| Gene Length | 771 bp |
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| Protein Length | 256 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637916677 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_523114 |
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| Protein GI | 89900643 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1174] ABC-type proline/glycine betaine transport systems, permease component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.930718 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGGCG CAGCGCCTGT CAGCGCCAGC GGCCGTGCCT GGGCTCGCGA TCCCTTGCCT
TGGGCCTTGG CTGCCTTGCT GCTGCTGGTC TTTGGCATGG CGTGGCTCAA GCCCCTGTTT
GCCGCGCTGT TTCCGGCGTT GGAGCGGCCG GTGTACGCGC AGGACAGCTT TTTGGGGCTG
ACGCTGGCGC ACCTGAAAAT CGTCGGTCTG TCCAGCGGTT TTGCCGTCAT CGTCGGTGTG
GCCGCGGGGA TTTTTGCCAC GCGGGCCAGC GGACGCGAGT TTCGCCCGCT GATTGAAACC
GTGGTGGCCG CCGGGCAGAC CTTTCCGCCG GTGGCGGTCT TGGCCGTGGC GGTTCCTGTG
GTGGGTTTTG GCGAAGCGCC GGCCCTGATC GCGCTCGCCC TGTATGGTTT GCTGCCGGTG
CTGCAAAGCA CCCTGGCCGG TATCGCCTCG GTGCCCCCGG CGGCGCGCGA AGCCGCTGAG
GGCCTGGGGC TGAGCCCCTG GCAGCGCCTG CTGCGCGTTG AGCTGCCGCT GGCCGCCCCG
GTGATTCTGG CGGGCGTGCG CACCTCGGTC ATTATCAATA TCGGCACCGC CGCCATTGCC
TCGACCGTCG GCGCCAAGAC ACTGGGCCTG CCGATCATTG TGGGCCTGAG TGGTTTTAAT
ACCGCGTATG TGCTGCAGGG CGCGGTGCTG GTGGGTTTGC TTGCGGTGGT AACCGACCTG
GGCTTTGAAA GGCTGGTGCA GCGGCTGGGA CGCTGGCAGT CAGCGCAGTA A
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| Protein sequence | MSGAAPVSAS GRAWARDPLP WALAALLLLV FGMAWLKPLF AALFPALERP VYAQDSFLGL
TLAHLKIVGL SSGFAVIVGV AAGIFATRAS GREFRPLIET VVAAGQTFPP VAVLAVAVPV
VGFGEAPALI ALALYGLLPV LQSTLAGIAS VPPAAREAAE GLGLSPWQRL LRVELPLAAP
VILAGVRTSV IINIGTAAIA STVGAKTLGL PIIVGLSGFN TAYVLQGAVL VGLLAVVTDL
GFERLVQRLG RWQSAQ
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