Gene EcHS_A2263 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A2263 
Symbol 
ID5593674 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand
Start bp2258102 
End bp2258833 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content58% 
IMG OID640921392 
Productquaternary amine ABC transporter permease 
Protein accessionYP_001458928 
Protein GI157161610 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1174] ABC-type proline/glycine betaine transport systems, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones73 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGATGT TGCGCGATCC GCTGTTCTGG CTCATTGCTC TGTTTGTGGC GCTGATTTTC 
TGGCTGCCTT ACAGCCAGCC GCTGTTTGCT GCCTTGTTCC CACAACTGCC ACGACCCGTT
TATCAGCAAG AAAGTTTTGC AGCTCTGGCA CTGGCTCATT TCTGGCTGGT GGGAATTTCG
AGTTTGTTTG CGGTGATCAT TGGCACTGGT GCCGGAATTG CTGTCACTCG CCCGTGGGGC
GCGGAATTTC GCCCACTGGT GGAAACTATT GCCGCCGTTG GACAGACTTT TCCGCCCGTC
GCAGTGCTGG CGATCGCCGT TCCGGTGATC GGCTTTGGTC TGCAACCAGC GATTATCGCC
TTGATCCTTT ACGGTGTGCT GCCCGTCCTG CAGGCGACAC TTGCCGGGCT GGGAGCGATT
GATGCCAGCG TGACAGAAGT TGCGAAAGGT ATGGGAATGA GTCGTGGTCA GCGACTGCGT
AAGGTCGAGC TACCGCTGGC GGCTCCGGTG ATTCTGGCGG GCGTGCGAAC TTCGGTGATT
ATCAACATTG GTACGGCGAC GATCGCCTCA ACGGTAGGGG CCAGCACGCT GGGTACGCCC
ATCATCATCG GGCTTAGCGG ATTTAATACC GCGTATGTGA TCCAGGGGGC GTTACTGGTG
GCACTGGCGG CGATCATCGC AGACCGCCTG TTTGAAAGGC TGGTGCAGGC GCTTAGCCAG
CACGCAAAAT AA
 
Protein sequence
MKMLRDPLFW LIALFVALIF WLPYSQPLFA ALFPQLPRPV YQQESFAALA LAHFWLVGIS 
SLFAVIIGTG AGIAVTRPWG AEFRPLVETI AAVGQTFPPV AVLAIAVPVI GFGLQPAIIA
LILYGVLPVL QATLAGLGAI DASVTEVAKG MGMSRGQRLR KVELPLAAPV ILAGVRTSVI
INIGTATIAS TVGASTLGTP IIIGLSGFNT AYVIQGALLV ALAAIIADRL FERLVQALSQ
HAK