| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oant_0296 |
|---|
| Symbol | |
|---|
| ID | 5380549 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ochrobactrum anthropi ATCC 49188 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009667 |
|---|
| Strand | - |
|---|
| Start bp | 312190 |
|---|
| End bp | 312936 |
|---|
| Gene Length | 747 bp |
|---|
| Protein Length | 248 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 640832946 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_001368856 |
|---|
| Protein GI | 153007641 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1174] ABC-type proline/glycine betaine transport systems, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGGTTGT TCCTGTCCCT TGTTCCACGT GCGCTGCTTC TGGGCGTTCT GCTGCTGTTT
CTGTGGCGGC CCCATCTTTT CGAGCCGTTG TTTCGACCGC TCGTCGATGA GGGCGTCCCG
GTCATTTATG ATCGTGCAAA CTTCGTGACA CTGACTTTGC AGCATCTCGG CCTGGTCGCT
CTGGCCGCAC TTGCATCCAC GATTGTAGCC GTCTCGATGG CAATCTTTGT TACCAGAAAG
CAGGGCGCAG AGTTTCTGCC ACTCTCACGC AGCCTTGTGA ATATCGGCCA GACCTTTCCT
CCAGTTGCAG TGCTGGCACT TGCAGTGCCG GTCTTCGGTT TCGGAGACAA GCCGACCCTG
ATTGCACTCT TCCTCTATGG TCTGCTTCCG ATTTTTGAAA ATACGCTGAC GGGACTAACG
ACTTTGCCGC CTCCGGTTGT CGAAGCTGCA CGCGGCATGG GGATGACCAG CGCGCAACGG
CTCGTGAAAG TCGAGGTTCC CCTTGCCATG CCGGTTATTC TGGCAGGTAT CAGACTTTCC
GTTGTGATCG GCCTTGCAAC GGCTACCATT GGCTCGACTG TCGCTGCCAG AACGCTTGGT
GAGGTCATCA TCGCCGGGCT CATTTCCAAC AATCTTGCCT TCGTTTTGCA GGGAGGGCTC
GTCGTGGCCG CACTTGCCAT ACTCATCTTC GATGGGTTTC AGGCAATTGA ACATTACCTC
ATGAAACGTT CCGGGCGAGC CATCTGA
|
|---|
| Protein sequence | MRLFLSLVPR ALLLGVLLLF LWRPHLFEPL FRPLVDEGVP VIYDRANFVT LTLQHLGLVA
LAALASTIVA VSMAIFVTRK QGAEFLPLSR SLVNIGQTFP PVAVLALAVP VFGFGDKPTL
IALFLYGLLP IFENTLTGLT TLPPPVVEAA RGMGMTSAQR LVKVEVPLAM PVILAGIRLS
VVIGLATATI GSTVAARTLG EVIIAGLISN NLAFVLQGGL VVAALAILIF DGFQAIEHYL
MKRSGRAI
|
|---|
| |