Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_13610 |
Symbol | |
ID | 4381933 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 1170390 |
End bp | 1171112 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639323643 |
Product | ABC transporter permease |
Protein accession | YP_789232 |
Protein GI | 116051925 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1174] ABC-type proline/glycine betaine transport systems, permease component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 53 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 57 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGTGAAAA CCTGTGGCAA GGCCCTGCTC GGCCTCTGCG CCGCAGCCGC CGTACTGGCC TTGCTGATCC ACTGGATCAC CCCCGCGACC ATCCTCCACT ACCGCGAGGA CCTGCTGTTC TACTTGCAGG CCCACCTGGT GCTGGTCTTC AGTTCGATGG CGGCCGCCCT GCTGGTCGGC GTGCCGGCCG GCATCCTGCT CAGCCGTCCC GGCATGCAGG CCCAGGCCGA ACGCCTGATG CAGGTGTTCA ACGTCGGCAA CACCATCCCG CCGCTGGCGG TGCTGGCCAT CGCCCTGGCG ATCATCGGCA TCGGCAACGG CCCGGCGATC CTCGCCCTGT TCCTCGCCTC GCTGCTGCCG ATCGTGCGCA ACACCTACGA GGGCCTGCGC AATGTCTCGC CGGCGCTGAA GGAAGCCGCC ACCGGCATCG GCATGACGCC CAACCAGGTG CTGCTGCGGG TGGAACTGCC GAACGCGGTG CCGATCATCG TCGGCGGCGT GCGCGTGGCC CTGGCGCTGA ACGTCGGCTC CGCGCCGCTG GCGTTCCTGA TCGGCGCCAA CAGCCTGGGC AGCCTGATCT TCCCCGGCAT CTACCTGAAC AACCACCAGC AACTGCTGCT CGGCGCCGCC TGCACGGCGC TCCTCGCCCT GCTGCTGGAC GCCCTGGTGG TGCTGTTCAG CCGCATGTTC CTGGAACGCG GCCTGACCGC CAAGGAGGCC TGA
|
Protein sequence | MVKTCGKALL GLCAAAAVLA LLIHWITPAT ILHYREDLLF YLQAHLVLVF SSMAAALLVG VPAGILLSRP GMQAQAERLM QVFNVGNTIP PLAVLAIALA IIGIGNGPAI LALFLASLLP IVRNTYEGLR NVSPALKEAA TGIGMTPNQV LLRVELPNAV PIIVGGVRVA LALNVGSAPL AFLIGANSLG SLIFPGIYLN NHQQLLLGAA CTALLALLLD ALVVLFSRMF LERGLTAKEA
|
| |