Gene PA14_13610 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_13610 
Symbol 
ID4381933 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp1170390 
End bp1171112 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content69% 
IMG OID639323643 
ProductABC transporter permease 
Protein accessionYP_789232 
Protein GI116051925 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1174] ABC-type proline/glycine betaine transport systems, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones53 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones57 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGAAAA CCTGTGGCAA GGCCCTGCTC GGCCTCTGCG CCGCAGCCGC CGTACTGGCC 
TTGCTGATCC ACTGGATCAC CCCCGCGACC ATCCTCCACT ACCGCGAGGA CCTGCTGTTC
TACTTGCAGG CCCACCTGGT GCTGGTCTTC AGTTCGATGG CGGCCGCCCT GCTGGTCGGC
GTGCCGGCCG GCATCCTGCT CAGCCGTCCC GGCATGCAGG CCCAGGCCGA ACGCCTGATG
CAGGTGTTCA ACGTCGGCAA CACCATCCCG CCGCTGGCGG TGCTGGCCAT CGCCCTGGCG
ATCATCGGCA TCGGCAACGG CCCGGCGATC CTCGCCCTGT TCCTCGCCTC GCTGCTGCCG
ATCGTGCGCA ACACCTACGA GGGCCTGCGC AATGTCTCGC CGGCGCTGAA GGAAGCCGCC
ACCGGCATCG GCATGACGCC CAACCAGGTG CTGCTGCGGG TGGAACTGCC GAACGCGGTG
CCGATCATCG TCGGCGGCGT GCGCGTGGCC CTGGCGCTGA ACGTCGGCTC CGCGCCGCTG
GCGTTCCTGA TCGGCGCCAA CAGCCTGGGC AGCCTGATCT TCCCCGGCAT CTACCTGAAC
AACCACCAGC AACTGCTGCT CGGCGCCGCC TGCACGGCGC TCCTCGCCCT GCTGCTGGAC
GCCCTGGTGG TGCTGTTCAG CCGCATGTTC CTGGAACGCG GCCTGACCGC CAAGGAGGCC
TGA
 
Protein sequence
MVKTCGKALL GLCAAAAVLA LLIHWITPAT ILHYREDLLF YLQAHLVLVF SSMAAALLVG 
VPAGILLSRP GMQAQAERLM QVFNVGNTIP PLAVLAIALA IIGIGNGPAI LALFLASLLP
IVRNTYEGLR NVSPALKEAA TGIGMTPNQV LLRVELPNAV PIIVGGVRVA LALNVGSAPL
AFLIGANSLG SLIFPGIYLN NHQQLLLGAA CTALLALLLD ALVVLFSRMF LERGLTAKEA