Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_2862 |
Symbol | |
ID | 6088868 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | - |
Start bp | 3158392 |
End bp | 3159228 |
Gene Length | 837 bp |
Protein Length | 278 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641597933 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_001721591 |
Protein GI | 170025086 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1174] ABC-type proline/glycine betaine transport systems, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.01956 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGCCAG CAGAAACCAA ACCTGATAAT ACAGCAGTGG GTGATGTGAA AAGTATTAAA CCGGGGCTGC GGTTTTGGTT TTGGCTAAAA GATCCTCTGT GTTGGGCGCT GCTCATCCTG TGTGGGTTGG TCTTCGGTAT GACCTTACTA CAGCGTTTCT TTACCGCATT GTTCCCAGAA CTTGATCGGC CTATCTATTT GCAAGATACC TTTTTTTCAT TGGTGGTCGC TCATGTATTA CTGGTATTGG CCTCCAGTAG TATTGCTGTT TTCATCGGTG TTACTACCGG GATTGCAGTA ACGCGCCCGG CAGGAAAGGA GTTTCGTTCG GTAGTGGAAA CGGTTGTGGC GATGGGGCAA ACATTTCCCC CTGTAGCGGT ACTCGCCATT GCGGTTCCTG TGATGGGGTT CAGTGAGAAA CCGGCGATTA TTGCACTGGT GCTTTATGGC TTATTGCCGA TTTTACAAGG CACCATTGCG GGTATTGAAT CCGTTTCGAC CAGTATCCGT GAAGTGGCGG CAGGTGTTGG GATGAGTGCG AGGCAGATCC TCTGGCAGGT GGAATTACCT TTGGCTGCGC CAGTGATTGT GGCGGGTATT CGCACTTCGG TAATCATCAA TATAGGTACT GCGGCTATCG CATCGACAGT AGGGACCAAG ACGCTTGGCT CTCCAATTAT TATCGGCCTC AGTGGCTTTA ATACCGCTTA CGTTATTCAG GGGGCCGCCG TTGTTGCGCT CTTGGCGATT ATTACTGATA TGATTTTCGA CCGTTGGACT CGGCGGTTGT CACGCTGGAG GGAACGACAC TCTCTTTCTG CTCCCCGAAC GGATTAA
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Protein sequence | MKPAETKPDN TAVGDVKSIK PGLRFWFWLK DPLCWALLIL CGLVFGMTLL QRFFTALFPE LDRPIYLQDT FFSLVVAHVL LVLASSSIAV FIGVTTGIAV TRPAGKEFRS VVETVVAMGQ TFPPVAVLAI AVPVMGFSEK PAIIALVLYG LLPILQGTIA GIESVSTSIR EVAAGVGMSA RQILWQVELP LAAPVIVAGI RTSVIINIGT AAIASTVGTK TLGSPIIIGL SGFNTAYVIQ GAAVVALLAI ITDMIFDRWT RRLSRWRERH SLSAPRTD
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