Gene Sare_1621 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_1621 
Symbol 
ID5703402 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp1855459 
End bp1856244 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content68% 
IMG OID641271129 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001536504 
Protein GI159037251 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1174] ABC-type proline/glycine betaine transport systems, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACCG TCACGGAAGC CAGGACCGAA CAGGTTGTCC TCACCCCGCC GTCTCGCTGG 
CGAGGGCTGC TACGTCGGCA CCTGGCCATG CCGGCGGTGC TCACGGTGGT GCTGCTCGGC
ACCTACCTCT GGGTCCGCTC CGCTGATCTG GACGACATCG AACGGCGCTC GCTGAACGCC
GACTACCTGC TGCGGACAGC CGGAGAGCAT GTGACGCTCA CCGCGCTGAC CACTGTGCTC
GTCGTGGCGA TCGCCGGCGG CGGCGGCATC CTGCTCACCC GCCGGAGCAT GCGATGGCTG
GCCCCGTTCG CCACCGGCCT GGCCAACATC GGGCAGGCCA CCCCCGCGAT CGGGCTACTC
GTCCTGTTGA GCATCTTCCT CGGCATCGGC TTCTCGACCG CGTTGATCGG CCTGGTCGCC
TACTCCGTTC TCCCGGTACT CCAGAACACC ATCGTCGGGA TCAACCAGGT GGACCGTCAC
CTGATCGAGG CGGGACGGGG CATCGGAATG TCACCGTTCA CCGTCCTGGT ACGGATCGAA
CTGCCGTTGG CCGTTCCCGT CATCCTCGCC GGTGTGCGAA CCGCGCTCGT CCTCGCCGTC
GGCGTGGCCA CCCTCGCCAC GTTCATCGAC GCCGGGGGCC TGGGCGCGAT GATCGTGACG
GGGATCAAGC TCCAACGCGA AACGGTCCTC GTCACCGGAG CCGTCCTGAC CGCGACCCTG
GCGTTGACCC TGGACTGGCT GGGCGGAGTG GTCTCCGACC TGCTGCGGCC CCGCGGACTT
GATTGA
 
Protein sequence
MSTVTEARTE QVVLTPPSRW RGLLRRHLAM PAVLTVVLLG TYLWVRSADL DDIERRSLNA 
DYLLRTAGEH VTLTALTTVL VVAIAGGGGI LLTRRSMRWL APFATGLANI GQATPAIGLL
VLLSIFLGIG FSTALIGLVA YSVLPVLQNT IVGINQVDRH LIEAGRGIGM SPFTVLVRIE
LPLAVPVILA GVRTALVLAV GVATLATFID AGGLGAMIVT GIKLQRETVL VTGAVLTATL
ALTLDWLGGV VSDLLRPRGL D