Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_1621 |
Symbol | |
ID | 5703402 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | - |
Start bp | 1855459 |
End bp | 1856244 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641271129 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_001536504 |
Protein GI | 159037251 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1174] ABC-type proline/glycine betaine transport systems, permease component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCACCG TCACGGAAGC CAGGACCGAA CAGGTTGTCC TCACCCCGCC GTCTCGCTGG CGAGGGCTGC TACGTCGGCA CCTGGCCATG CCGGCGGTGC TCACGGTGGT GCTGCTCGGC ACCTACCTCT GGGTCCGCTC CGCTGATCTG GACGACATCG AACGGCGCTC GCTGAACGCC GACTACCTGC TGCGGACAGC CGGAGAGCAT GTGACGCTCA CCGCGCTGAC CACTGTGCTC GTCGTGGCGA TCGCCGGCGG CGGCGGCATC CTGCTCACCC GCCGGAGCAT GCGATGGCTG GCCCCGTTCG CCACCGGCCT GGCCAACATC GGGCAGGCCA CCCCCGCGAT CGGGCTACTC GTCCTGTTGA GCATCTTCCT CGGCATCGGC TTCTCGACCG CGTTGATCGG CCTGGTCGCC TACTCCGTTC TCCCGGTACT CCAGAACACC ATCGTCGGGA TCAACCAGGT GGACCGTCAC CTGATCGAGG CGGGACGGGG CATCGGAATG TCACCGTTCA CCGTCCTGGT ACGGATCGAA CTGCCGTTGG CCGTTCCCGT CATCCTCGCC GGTGTGCGAA CCGCGCTCGT CCTCGCCGTC GGCGTGGCCA CCCTCGCCAC GTTCATCGAC GCCGGGGGCC TGGGCGCGAT GATCGTGACG GGGATCAAGC TCCAACGCGA AACGGTCCTC GTCACCGGAG CCGTCCTGAC CGCGACCCTG GCGTTGACCC TGGACTGGCT GGGCGGAGTG GTCTCCGACC TGCTGCGGCC CCGCGGACTT GATTGA
|
Protein sequence | MSTVTEARTE QVVLTPPSRW RGLLRRHLAM PAVLTVVLLG TYLWVRSADL DDIERRSLNA DYLLRTAGEH VTLTALTTVL VVAIAGGGGI LLTRRSMRWL APFATGLANI GQATPAIGLL VLLSIFLGIG FSTALIGLVA YSVLPVLQNT IVGINQVDRH LIEAGRGIGM SPFTVLVRIE LPLAVPVILA GVRTALVLAV GVATLATFID AGGLGAMIVT GIKLQRETVL VTGAVLTATL ALTLDWLGGV VSDLLRPRGL D
|
| |