Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_1634 |
Symbol | |
ID | 5058093 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | - |
Start bp | 1860088 |
End bp | 1860873 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640473907 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_001158477 |
Protein GI | 145594180 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1174] ABC-type proline/glycine betaine transport systems, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.649793 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.788807 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGGCG CCACAAAGAT CCAGGCCGAA GAGACCGTAC TAGCTCCGCC GTCACGCTGG CGCGGGCTAC TACGGCGACA CCGCACGATG CCGATGATCC TCGCGGTGGT GCTGCTCGGC ACCTACCTCT GGGTCAGCGC CACGGATCTG GACGACATCG AACGGCGCGC CCTGGACGTG GACAACCTGC TGCGGGCGGC CGGAGAGCAT GTGACGCTCA CCGCGCTGAC CACCCTGCTC GTCGTGGCGA TCGCCGGCGG TGGCGGCATC CTGCTCACCC GTCCCTCCAT GCGGTGGCTG ACTCCGTTCG CCACCGGCCT GGCCAACATC GGGCAGGCGA CTCCCGCGAT CGGGCTGCTC GTCCTGTTGA GCATCTTTCT CGGCATCGGC TTCTCGACCG CGTTGATCTG CCTGGTCGCC TACTCCGTCC TTCCCGTACT CCAGAACACC ATCGTCGGGA TCAACCAGGT GGACCGCCAC CTGATCGAGG CAGGACGGGG TATCGGTATG TCACCCCTGA CCGTCCTGCT CCGAATCGAA CTGCCGTTGG CTGTTCCCGT GATCCTCGCC GGCGTGCGGA CCGCAATCGT CCTCGCCGTC GGCGTGGCCA CCCTCGCCAC GTTCATCAAC GCCGGCGGAC TGGGCTCGCT GATCGTGACC GGGATCAAGC TTCAACGCGA AACGATCCTC GTCACCGGCG CCGTCCTGAC CGCGACCCTC GCGTTGACCC TGGACTGGCT GGGCGGAGTC CTCTCCGACC TGCTACGGCC CCGCGGGCTT GACTGA
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Protein sequence | MSGATKIQAE ETVLAPPSRW RGLLRRHRTM PMILAVVLLG TYLWVSATDL DDIERRALDV DNLLRAAGEH VTLTALTTLL VVAIAGGGGI LLTRPSMRWL TPFATGLANI GQATPAIGLL VLLSIFLGIG FSTALICLVA YSVLPVLQNT IVGINQVDRH LIEAGRGIGM SPLTVLLRIE LPLAVPVILA GVRTAIVLAV GVATLATFIN AGGLGSLIVT GIKLQRETIL VTGAVLTATL ALTLDWLGGV LSDLLRPRGL D
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