| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3118 |
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| Symbol | |
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| ID | 5107440 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 3445252 |
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| End bp | 3445980 |
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| Gene Length | 729 bp |
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| Protein Length | 242 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 640504374 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001188603 |
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| Protein GI | 146308138 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1174] ABC-type proline/glycine betaine transport systems, permease component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.0982336 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.0324011 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTCGCT GGCTGCCGCC GCTGCTGTGG CTGGCCCTGC TGCTGGGCGC CAGCTTCGCC
ATGGAGCGGC TGGAACCGCT GCTGCGCTGG CTCGACCCCG ACAGCCGTCA GTTGCTCTAC
CAGCGCGCCA GCCTCGCCGC TCTGCTCGGC CGGCATCTGC TGATCGTCGC CTGCGCCGGC
GGCCTGGCGG TGCTGCTCGG CGTCACCGCC GGCATCCTGG TGACCCGCTC CTGGGGCCGC
GATTTCCTGC CGCTGGCCAG CCAGGTGGCG TCCATCGGCC AGACCTTCCC GCCGGTGGCC
GTGCTGGCGC TGAGCGTGCC GCTGCTCGGC TTCGGCGCCC TGCCGACGAT AGTCGCGCTG
CTGCTCTACG GCCTGCTGCC GGTGCTGCGC AACAGCCTGG CCGGGCTGCA GGGCGTGCCG
CCGGCCGTGC TCGAAGCCGC GCGCGGCATG GGCATGTCGC CGCTGCGTGT GCTCTGGCAG
GTTGAGCTGC CGCTGGCCCG ACCAGTGATT CTGGCCGGCG TACGCACCTG CCTGACCCTG
AGCATCGCCA CCGCCGCCCT AGGCTCGACG GTCGGTGCCA GCACCCTCGG CGATCCGCTG
ATCGCGGGGC TGGTCAACGG CAACAACGCC TACCTGCTGC AGGGCGCACT GCTGATCGGC
CTGCTGGCGT TGTGTGTGGA CAGCCTGTTC GGCGCGCTGA GCGGCCCCGG GCCACGCTCG
CCTGGTTAG
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| Protein sequence | MRRWLPPLLW LALLLGASFA MERLEPLLRW LDPDSRQLLY QRASLAALLG RHLLIVACAG
GLAVLLGVTA GILVTRSWGR DFLPLASQVA SIGQTFPPVA VLALSVPLLG FGALPTIVAL
LLYGLLPVLR NSLAGLQGVP PAVLEAARGM GMSPLRVLWQ VELPLARPVI LAGVRTCLTL
SIATAALGST VGASTLGDPL IAGLVNGNNA YLLQGALLIG LLALCVDSLF GALSGPGPRS
PG
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