Gene SeD_A2508 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A2508 
Symbol 
ID6874970 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp2387791 
End bp2388522 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content60% 
IMG OID642785588 
Productinner membrane ABC transporter permease YehW 
Protein accessionYP_002216246 
Protein GI198241930 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1174] ABC-type proline/glycine betaine transport systems, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.938307 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones80 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAACGAC TGTGTGATCC GCTTCTCTGG CTTATTGTTC TGTTCTTGCT TCTGCTGTTT 
GGATTGCCTT ATAGCCAGCC GTTCTTCGCC GCGCTGTTTC CCGATTTACC GCGCCCGGTC
TACCAACAGG AGAGTTTTGC CGCCCTCGCG CTCGCCCATT TCTGGTTGGT GGGCATCTCA
AGTTTGTTTG CCGTCGTGGT GGGCGTCGGC GCAGGGATTG CGGTCACGCG AGAAAGTGGG
AAAGAGTTTC GTCCCCTGGT GGAGACTATC GCCGCCGTCG GGCAGACCTT TCCGCCGGTC
GCGGTACTGG CGATCGCGGT ACCCGTCATG GGTTTTGGTC AGCAACCGGC CATTATCGCC
TTGATCCTGT ATGGGGTGTT GCCCATCCTG CAGGCGACCC TGGCCGGGCT GGGCGCGGTG
CCTGCCAGCG TGATGAGCGT TGCCAGCGGT ATGGGAATGA GCCGTCGCCA ACAGTTGTAT
CAGGTTGAGC TGCCGCTGGC CGCGCCGGTG ATTCTGGCGG GCATCCGAAC CTCGGTGATT
ATCAATATTG GTACGGCGAC CATCGCTTCA ACGGTGGGGG CCAGTACGTT AGGCACGCCG
ATCATTATCG GGCTTAGCGG CTTTAATACG GCCTATGTTA TCCAGGGGGC GCTGCTGGTG
GCGCTGGCGG CGATCATTAT CGATCGCCTG TTTGAAAGGC TGACGCGCGC GCTTACCCGG
CACGCAAAAT AA
 
Protein sequence
MKRLCDPLLW LIVLFLLLLF GLPYSQPFFA ALFPDLPRPV YQQESFAALA LAHFWLVGIS 
SLFAVVVGVG AGIAVTRESG KEFRPLVETI AAVGQTFPPV AVLAIAVPVM GFGQQPAIIA
LILYGVLPIL QATLAGLGAV PASVMSVASG MGMSRRQQLY QVELPLAAPV ILAGIRTSVI
INIGTATIAS TVGASTLGTP IIIGLSGFNT AYVIQGALLV ALAAIIIDRL FERLTRALTR
HAK