Gene Bcen_3223 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_3223 
Symbol 
ID4095443 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008061 
Strand
Start bp286732 
End bp287499 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content71% 
IMG OID638016522 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_623091 
Protein GI107025580 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1174] ABC-type proline/glycine betaine transport systems, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.362528 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGACCT GCGGCAACGT GCAGTTCCAG CAGTCGTCAC TTCCCGCGTA CGTCGCCCGC 
GCGGCCGCGC TCGTGCTGCT GCTCGTGCTG CTGTTGCGCC CCGCGTGGCT GCAGGGTCTG
TTCGCGCCGT TCGCGGACAA CGGCGCGCCG GTGATCTACG ATCGCGCGAG CCTGCTCGAC
CTCACGCTCG CGCATCTCGG CACGGTCGCG CTGTCGAGCC TGATCGGTAC GATCGTCGCG
GTCGCGGCCG GCATCGCGGT CACGCGGCCG TTCGGCGCGG ATTTCCTGCC GGTCGCGCGA
AGCGTCGTCG ATATCGGCCA GACCTTCCCG CCGGTCGCCG TGCTCGCGCT CGCCGTGCCG
GCCGTCGGCT TCGGCTTGAA GCCGGTGCTG ATCGCGCTCG TGCTGTACGG GCTCCTGCCG
ATTTTCGAAA GCACGATCGC GGGGCTCGAG GACGTGCCGC GCGACGTCGT CGACGCCGCG
CGCGGGATGG GGATGAGCGG CTGGCAGCAA CTGGTGTCCG TCGAGCTGCC GCTCGCGTTC
CCGGTGATCG TCAACGGCAT CCGCCTCGCG GTCGTGATCA ATCTCGGCAC GGCGACGATC
GGCTCGACGG TGGCCGCGCG CGGGCTCGGC GACGTGATCA TCGCGGGCCT GCAGACGTCG
AACACCGCGT TCGTGCTGCA AGGCGGCGTG ATCGTCGGCT TGCTCGCGGT GCTCGTCAGC
GATGCGATCG GCGCGATTGC GCGGGCGGCG AGCGCGCGGC GCGCGTAG
 
Protein sequence
MTTCGNVQFQ QSSLPAYVAR AAALVLLLVL LLRPAWLQGL FAPFADNGAP VIYDRASLLD 
LTLAHLGTVA LSSLIGTIVA VAAGIAVTRP FGADFLPVAR SVVDIGQTFP PVAVLALAVP
AVGFGLKPVL IALVLYGLLP IFESTIAGLE DVPRDVVDAA RGMGMSGWQQ LVSVELPLAF
PVIVNGIRLA VVINLGTATI GSTVAARGLG DVIIAGLQTS NTAFVLQGGV IVGLLAVLVS
DAIGAIARAA SARRA