| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_6581 |
|---|
| Symbol | |
|---|
| ID | 6125504 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010512 |
|---|
| Strand | + |
|---|
| Start bp | 641879 |
|---|
| End bp | 642595 |
|---|
| Gene Length | 717 bp |
|---|
| Protein Length | 238 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641647594 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_001774191 |
|---|
| Protein GI | 170735077 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1174] ABC-type proline/glycine betaine transport systems, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.191415 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.0371863 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTCGAC GCACTGTCCA GCTGGTGGGC AGCCTGGTGG CAATCATCGC CGTGGGATGG
GCATTGGCGC GCGGCATCGG CGCCGAAACG TTCCATCAGC GCGCGGACGA TCTCGCCTAC
TACGCGGGCC AGCACATGCT GCTGGTCGTC TATTCGATGA CACTGGCCAT CGCCGTAGGC
GTGCCGGCCG GCGTATTGCT GAGCCGGCCT CGATTCCAGC ATCAGGCCGA GCGCTTCATG
CAGGTCTTCA ACATCGGCAA CACGATCCCG TCGCTCGCGG TGCTCGCCAT CGCGCTCGGC
ATCTTCGGCA TCGGCAACGT GCCCGCGATC GTCGCGCTGT TCCTCGCGTC GCTGCTGCCC
GTCACGCGCA ATGCCTACGA AGGCATGAAG AACGTGCCGG CCGCGCTGCG CGAGGCCGCC
AAGGGTATCG GCATGACCGG CTGGCAGTCG CTGGTTCGCG TGGAACTGCC CAATGCACTG
CCGATCATCG TCGGCGGCGT GCGCACCGCG CTCGCGATCA ACGTCGGGAC GGCGCCGCTC
GCGTACCTGA TCGGCGCGGA CAGCCTCGGC TCGCTGATCT TCCCCGGCAT CTACCTCGAC
AACCAGCCGC TGCTGCTGCT CGGCGCGTCG CTCACCGCGA TCCTCGCACT GGTGCTGGAC
GGCATCGTCG CGGCCGGCAG CCGCCATTGG CTCGCACGCC ATGGAGGTGC CGCATGA
|
|---|
| Protein sequence | MTRRTVQLVG SLVAIIAVGW ALARGIGAET FHQRADDLAY YAGQHMLLVV YSMTLAIAVG
VPAGVLLSRP RFQHQAERFM QVFNIGNTIP SLAVLAIALG IFGIGNVPAI VALFLASLLP
VTRNAYEGMK NVPAALREAA KGIGMTGWQS LVRVELPNAL PIIVGGVRTA LAINVGTAPL
AYLIGADSLG SLIFPGIYLD NQPLLLLGAS LTAILALVLD GIVAAGSRHW LARHGGAA
|
|---|
| |