More than 300 homologs were found in PanDaTox collection
for query gene Mnod_6753 on replicon NC_011894
Organism: Methylobacterium nodulans ORS 2060



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011894  Mnod_6753  binding-protein-dependent transport systems inner membrane component  100 
 
 
310 aa  600  1e-170  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.114113  n/a   
 
 
-
 
NC_010511  M446_6662  binding-protein-dependent transport systems inner membrane component  84.87 
 
 
288 aa  431  1e-120  Methylobacterium sp. 4-46  Bacteria  normal  0.256172  normal  0.0292677 
 
 
-
 
NC_013421  Pecwa_0841  binding-protein-dependent transport systems inner membrane component  49.1 
 
 
290 aa  246  4.9999999999999997e-64  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_0627  binding-protein-dependent transport systems inner membrane component  48.57 
 
 
290 aa  245  6.999999999999999e-64  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_3266  binding-protein-dependent transport systems inner membrane component  47.33 
 
 
290 aa  221  1.9999999999999999e-56  Dickeya dadantii Ech703  Bacteria  normal  0.221371  n/a   
 
 
-
 
NC_012912  Dd1591_3382  binding-protein-dependent transport systems inner membrane component  49.37 
 
 
290 aa  202  8e-51  Dickeya zeae Ech1591  Bacteria  normal  0.514043  n/a   
 
 
-
 
NC_012669  Bcav_2847  binding-protein-dependent transport systems inner membrane component  38.38 
 
 
305 aa  197  2.0000000000000003e-49  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.661532 
 
 
-
 
NC_008043  TM1040_3215  binding-protein-dependent transport systems inner membrane component  43.03 
 
 
291 aa  196  3e-49  Ruegeria sp. TM1040  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_5305  binding-protein-dependent transport systems inner membrane component  41.98 
 
 
298 aa  194  1e-48  Delftia acidovorans SPH-1  Bacteria  normal  normal  0.688973 
 
 
-
 
NC_011769  DvMF_0657  binding-protein-dependent transport systems inner membrane component  39.93 
 
 
297 aa  189  5e-47  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.235569 
 
 
-
 
NC_011992  Dtpsy_2658  binding-protein-dependent transport systems inner membrane component  41.56 
 
 
300 aa  189  5e-47  Acidovorax ebreus TPSY  Bacteria  decreased coverage  0.00312349  n/a   
 
 
-
 
NC_011831  Cagg_2193  binding-protein-dependent transport systems inner membrane component  39.33 
 
 
306 aa  189  5.999999999999999e-47  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.692762  normal 
 
 
-
 
NC_008782  Ajs_3305  binding-protein-dependent transport systems inner membrane component  41.56 
 
 
300 aa  188  8e-47  Acidovorax sp. JS42  Bacteria  normal  0.980927  normal 
 
 
-
 
NC_008751  Dvul_0223  binding-protein-dependent transport systems inner membrane component  39.43 
 
 
293 aa  188  9e-47  Desulfovibrio vulgaris DP4  Bacteria  normal  normal 
 
 
-
 
NC_009667  Oant_1668  binding-protein-dependent transport systems inner membrane component  38.76 
 
 
310 aa  181  2e-44  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2208  binding-protein-dependent transport systems inner membrane component  36.43 
 
 
306 aa  179  4.999999999999999e-44  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.739705  n/a   
 
 
-
 
NC_009504  BOV_A1085  putative sugar ABC transporter, permease protein  38.76 
 
 
319 aa  178  9e-44  Brucella ovis ATCC 25840  Bacteria  normal  0.589946  n/a   
 
 
-
 
NC_004311  BRA1182  sugar ABC transporter, permease protein, putative  38.76 
 
 
319 aa  178  1e-43  Brucella suis 1330  Bacteria  normal  0.547049  n/a   
 
 
-
 
NC_011725  BCB4264_A0604  putative glycerol-3-phosphate ABC transporter, permease protein  34.97 
 
 
310 aa  176  4e-43  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_010816  BLD_1549  MalF-type ABC sugar transport systems permease component  35.5 
 
 
317 aa  176  4e-43  Bifidobacterium longum DJO10A  Bacteria  normal  0.649517  n/a   
 
 
-
 
NC_011772  BCG9842_B4735  putative glycerol-3-phosphate ABC transporter, permease protein  34.97 
 
 
310 aa  176  5e-43  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_014213  Mesil_3227  extracellular solute-binding protein family 1  38.08 
 
 
307 aa  175  7e-43  Meiothermus silvanus DSM 9946  Bacteria  decreased coverage  0.00159401  normal  0.987884 
 
 
-
 
NC_014213  Mesil_3421  binding-protein-dependent transport systems inner membrane component  38.08 
 
 
307 aa  175  7e-43  Meiothermus silvanus DSM 9946  Bacteria  normal  0.556907  normal 
 
 
-
 
NC_006274  BCZK0480  glycerol-3-phosphate ABC transporter, permease  34.97 
 
 
310 aa  175  9e-43  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_0623  putative glycerol-3-phosphate ABC transporter, permease protein  34.97 
 
 
310 aa  175  9e-43  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_003909  BCE_0630  glycerol-3-phosphate ABC transporter, permease protein, putative  34.97 
 
 
310 aa  174  9.999999999999999e-43  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A0698  putative glycerol-3-phosphate ABC transporter, permease protein  34.97 
 
 
310 aa  175  9.999999999999999e-43  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_0478  glycerol-3-phosphate ABC transporter, permease  34.97 
 
 
310 aa  174  1.9999999999999998e-42  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_011884  Cyan7425_0944  binding-protein-dependent transport systems inner membrane component  39.06 
 
 
290 aa  174  1.9999999999999998e-42  Cyanothece sp. PCC 7425  Bacteria  normal  0.120711  normal  0.307929 
 
 
-
 
NC_005945  BAS0536  glycerol-3-phosphate ABC transporter permease  34.64 
 
 
310 aa  173  2.9999999999999996e-42  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_0567  glycerol-3-phosphate ABC transporter permease protein  34.64 
 
 
310 aa  173  2.9999999999999996e-42  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_012793  GWCH70_1390  binding-protein-dependent transport systems inner membrane component  34.42 
 
 
308 aa  172  5e-42  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_3982  binding-protein-dependent transport systems inner membrane component  39.43 
 
 
316 aa  172  5.999999999999999e-42  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_010184  BcerKBAB4_0481  binding-protein-dependent transport systems inner membrane component  35.74 
 
 
310 aa  170  3e-41  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2615  binding-protein-dependent transport systems inner membrane component  36.24 
 
 
307 aa  169  4e-41  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.0000296099  n/a   
 
 
-
 
NC_011992  Dtpsy_0790  binding-protein-dependent transport systems inner membrane component  34.84 
 
 
293 aa  168  1e-40  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_007413  Ava_0563  binding-protein dependent transport system inner membrane protein  39.49 
 
 
294 aa  168  1e-40  Anabaena variabilis ATCC 29413  Bacteria  normal  0.22835  normal  0.0558608 
 
 
-
 
NC_012669  Bcav_2264  binding-protein-dependent transport systems inner membrane component  34.74 
 
 
307 aa  168  1e-40  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.277747  normal 
 
 
-
 
NC_008782  Ajs_0861  binding-protein-dependent transport systems inner membrane component  34.84 
 
 
293 aa  168  1e-40  Acidovorax sp. JS42  Bacteria  normal  normal  0.533828 
 
 
-
 
NC_011368  Rleg2_4663  binding-protein-dependent transport systems inner membrane component  36.27 
 
 
299 aa  166  2.9999999999999998e-40  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.456499 
 
 
-
 
NC_013235  Namu_3848  binding-protein-dependent transport systems inner membrane component  37.45 
 
 
320 aa  166  5e-40  Nakamurella multipartita DSM 44233  Bacteria  normal  0.0230008  normal  0.429544 
 
 
-
 
NC_013131  Caci_7515  binding-protein-dependent transport systems inner membrane component  36.58 
 
 
314 aa  166  6.9999999999999995e-40  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_3651  binding-protein-dependent transport systems inner membrane component  35.97 
 
 
301 aa  165  8e-40  Acidovorax citrulli AAC00-1  Bacteria  normal  0.0332234  normal 
 
 
-
 
NC_013526  Tter_2292  binding-protein-dependent transport systems inner membrane component  35.31 
 
 
306 aa  164  1.0000000000000001e-39  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_012848  Rleg_4750  binding-protein-dependent transport systems inner membrane component  35.56 
 
 
299 aa  164  2.0000000000000002e-39  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.62916  normal  0.701692 
 
 
-
 
NC_013131  Caci_4319  binding-protein-dependent transport systems inner membrane component  34.91 
 
 
312 aa  164  2.0000000000000002e-39  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.778687  hitchhiker  0.00185272 
 
 
-
 
NC_011884  Cyan7425_3980  binding-protein-dependent transport systems inner membrane component  37.02 
 
 
299 aa  164  2.0000000000000002e-39  Cyanothece sp. PCC 7425  Bacteria  normal  hitchhiker  0.00655631 
 
 
-
 
NC_009636  Smed_2314  binding-protein-dependent transport systems inner membrane component  40.6 
 
 
310 aa  164  2.0000000000000002e-39  Sinorhizobium medicae WSM419  Bacteria  normal  0.498676  normal  0.350334 
 
 
-
 
NC_013205  Aaci_0077  binding-protein-dependent transport systems inner membrane component  34.77 
 
 
311 aa  163  4.0000000000000004e-39  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_03080  permease component of ABC-type sugar transporter  36.79 
 
 
322 aa  162  5.0000000000000005e-39  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.151535  normal 
 
 
-
 
NC_012791  Vapar_4135  binding-protein-dependent transport systems inner membrane component  36.84 
 
 
293 aa  162  7e-39  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_0176  binding-protein dependent transport system inner membrane protein  40.43 
 
 
314 aa  162  8.000000000000001e-39  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_011981  Avi_7347  ABC transporter membrane spanning protein (sugar)  33.91 
 
 
320 aa  162  9e-39  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_007958  RPD_3149  binding-protein-dependent transport systems inner membrane component  39.34 
 
 
315 aa  161  1e-38  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.0566553  normal  0.330059 
 
 
-
 
NC_010681  Bphyt_3510  binding-protein-dependent transport systems inner membrane component  36.59 
 
 
294 aa  161  1e-38  Burkholderia phytofirmans PsJN  Bacteria  normal  0.0526035  normal  0.0342542 
 
 
-
 
NC_011368  Rleg2_5336  binding-protein-dependent transport systems inner membrane component  33.67 
 
 
318 aa  162  1e-38  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.949955  normal 
 
 
-
 
NC_012848  Rleg_5053  binding-protein-dependent transport systems inner membrane component  32.69 
 
 
318 aa  160  2e-38  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.0625824  normal 
 
 
-
 
NC_012669  Bcav_3573  binding-protein-dependent transport systems inner membrane component  36.21 
 
 
353 aa  161  2e-38  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.500594  normal 
 
 
-
 
NC_012669  Bcav_1699  binding-protein-dependent transport systems inner membrane component  41.53 
 
 
315 aa  160  2e-38  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.258357  normal 
 
 
-
 
NC_012669  Bcav_0321  binding-protein-dependent transport systems inner membrane component  36.45 
 
 
316 aa  160  2e-38  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_010682  Rpic_1093  binding-protein-dependent transport systems inner membrane component  35.96 
 
 
293 aa  160  3e-38  Ralstonia pickettii 12J  Bacteria  normal  0.0106698  normal 
 
 
-
 
NC_007951  Bxe_A0447  ABC sugar transporter, inner membrane subunit  36.24 
 
 
294 aa  159  5e-38  Burkholderia xenovorans LB400  Bacteria  normal  0.316903  normal 
 
 
-
 
NC_012856  Rpic12D_1186  binding-protein-dependent transport systems inner membrane component  35.96 
 
 
293 aa  159  5e-38  Ralstonia pickettii 12D  Bacteria  normal  0.0963268  normal 
 
 
-
 
NC_008699  Noca_4634  binding-protein-dependent transport systems inner membrane component  37.17 
 
 
292 aa  159  5e-38  Nocardioides sp. JS614  Bacteria  normal  0.219562  n/a   
 
 
-
 
NC_011071  Smal_2682  binding-protein-dependent transport systems inner membrane component  37.55 
 
 
293 aa  159  6e-38  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.990678  normal 
 
 
-
 
NC_007434  BURPS1710b_3725  binding-protein-dependent transporter inner membrane protein  38.62 
 
 
322 aa  159  8e-38  Burkholderia pseudomallei 1710b  Bacteria  normal  0.119738  n/a   
 
 
-
 
NC_012669  Bcav_1297  binding-protein-dependent transport systems inner membrane component  33.7 
 
 
279 aa  158  1e-37  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.983189  normal 
 
 
-
 
NC_008785  BMASAVP1_A3210  glycerol-3-phosphate ABC transporter, permease protein  38.62 
 
 
294 aa  158  1e-37  Burkholderia mallei SAVP1  Bacteria  normal  0.0692597  n/a   
 
 
-
 
NC_008836  BMA10229_A1761  glycerol-3-phosphate ABC transporter, permease protein  38.62 
 
 
294 aa  158  1e-37  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_009074  BURPS668_3696  sn-glycerol-3-phosphate transport system permease protein ugpA  38.89 
 
 
322 aa  158  1e-37  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_009076  BURPS1106A_3754  sn-glycerol-3-phosphate transport system permease protein ugpA  38.62 
 
 
294 aa  158  1e-37  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_009080  BMA10247_2793  glycerol-3-phosphate ABC transporter, permease protein  38.62 
 
 
294 aa  158  1e-37  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_11610  permease component of ABC-type sugar transporter  34.74 
 
 
311 aa  158  1e-37  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.117578  normal  0.102082 
 
 
-
 
NC_010513  Xfasm12_1606  ABC transporter sugar permease  38.93 
 
 
293 aa  158  1e-37  Xylella fastidiosa M12  Bacteria  normal  n/a   
 
 
-
 
NC_007510  Bcep18194_A3493  ABC sugar transporter, inner membrane subunit  38.57 
 
 
294 aa  157  2e-37  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_010084  Bmul_0299  binding-protein-dependent transport systems inner membrane component  38.62 
 
 
313 aa  157  2e-37  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_010003  Pmob_0955  binding-protein-dependent transport systems inner membrane component  36.59 
 
 
291 aa  157  2e-37  Petrotoga mobilis SJ95  Bacteria  normal  0.0196347  n/a   
 
 
-
 
NC_011899  Hore_20620  binding-protein-dependent transport systems inner membrane component  31.58 
 
 
299 aa  157  2e-37  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_15070  permease component of ABC-type sugar transporter  38.13 
 
 
311 aa  157  2e-37  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.0771026  normal 
 
 
-
 
NC_013947  Snas_3122  binding-protein-dependent transport systems inner membrane component  39.11 
 
 
305 aa  157  2e-37  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.99861  hitchhiker  0.000381845 
 
 
-
 
NC_003295  RSc1265  SN-glycerol-3-phosphate transmembrane ABC transporter protein  34.38 
 
 
293 aa  157  3e-37  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_008390  Bamb_0315  binding-protein-dependent transport systems inner membrane component  38.28 
 
 
313 aa  156  3e-37  Burkholderia ambifaria AMMD  Bacteria  normal  n/a   
 
 
-
 
NC_010577  XfasM23_1549  binding-protein-dependent transport systems inner membrane component  38.52 
 
 
293 aa  157  3e-37  Xylella fastidiosa M23  Bacteria  normal  0.563461  n/a   
 
 
-
 
NC_010320  Teth514_2200  binding-protein-dependent transport systems inner membrane component  34.49 
 
 
299 aa  156  3e-37  Thermoanaerobacter sp. X514  Bacteria  normal  0.426381  n/a   
 
 
-
 
NC_013172  Bfae_29410  carbohydrate ABC transporter membrane protein  36.88 
 
 
322 aa  156  4e-37  Brachybacterium faecium DSM 4810  Bacteria  normal  0.899558  n/a   
 
 
-
 
NC_010551  BamMC406_0324  binding-protein-dependent transport systems inner membrane component  37.88 
 
 
294 aa  156  4e-37  Burkholderia ambifaria MC40-6  Bacteria  normal  0.594237  normal  0.576949 
 
 
-
 
NC_009767  Rcas_0115  binding-protein-dependent transport systems inner membrane component  34.56 
 
 
303 aa  156  5.0000000000000005e-37  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.013229  normal 
 
 
-
 
NC_012669  Bcav_1523  binding-protein-dependent transport systems inner membrane component  35.64 
 
 
321 aa  155  6e-37  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_007651  BTH_I3020  glycerol-3-phosphate ABC transporter, permease protein  37.5 
 
 
319 aa  155  6e-37  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_4568  binding-protein-dependent transport systems inner membrane component  32.42 
 
 
352 aa  155  6e-37  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_008060  Bcen_2711  binding-protein-dependent transport systems inner membrane component  36.97 
 
 
294 aa  155  7e-37  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.691644  n/a   
 
 
-
 
NC_008542  Bcen2424_0396  binding-protein-dependent transport systems inner membrane component  36.97 
 
 
294 aa  155  7e-37  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_2801  binding-protein-dependent transport systems inner membrane component  35.05 
 
 
288 aa  155  1e-36  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.254018  n/a   
 
 
-
 
NC_010508  Bcenmc03_0375  binding-protein-dependent transport systems inner membrane component  36.97 
 
 
294 aa  155  1e-36  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_009832  Spro_0235  glycerol-3-phosphate transporter permease  34.88 
 
 
295 aa  155  1e-36  Serratia proteamaculans 568  Bacteria  normal  normal  0.689889 
 
 
-
 
NC_009939  Dgeo_2918  ABC-type sugar transport system, permease component  35.67 
 
 
305 aa  155  1e-36  Deinococcus geothermalis DSM 11300  Bacteria  n/a    n/a   
 
 
-
 
NC_007604  Synpcc7942_0526  ABC-type sugar transport systems permease components-like  37.63 
 
 
293 aa  154  2e-36  Synechococcus elongatus PCC 7942  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_0016  binding-protein-dependent transport systems inner membrane component  36.08 
 
 
311 aa  154  2e-36  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.17058  normal 
 
 
-
 
NC_011004  Rpal_0131  binding-protein-dependent transport systems inner membrane component  35.87 
 
 
319 aa  154  2e-36  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.128042  n/a   
 
 
-
 
NC_013526  Tter_2000  binding-protein-dependent transport systems inner membrane component  33.79 
 
 
319 aa  154  2e-36  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
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