Gene Spro_0235 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_0235 
Symbol 
ID5606423 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp264837 
End bp265724 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content58% 
IMG OID640935726 
Productglycerol-3-phosphate transporter permease 
Protein accessionYP_001476473 
Protein GI157368484 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1175] ABC-type sugar transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.689889 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCATCTT CCCGTCCCGG TTTCGGCTGT AGCTGGCTGC CCTATGTATT GGTGCTGCCG 
CAACTGTTGA TCACCGCAAT CTTTTTCCTG TGGCCCGCCG GCGAGGCGCT GTGGTATTCG
GTGCAGAGCC TCGATCCCTT CGGCCTGTCC AGCCAGTTTG TCGGCCTGGA TAACTTTACC
CAGCTGTTCC AGGATCCTTA CTACCTCGAT TCGTTTTACA CCACGCTGAT TTTCAGTTTC
CTGGTGGCGG GTATCGGGCT GGTCGTGTCG TTGTTCTTCG CTGCGCTGGT GGATTACGTG
CTGCGCGGCA GCCGGATTTA CCAGACGCTG ATGATCTTGC CTTATGCGGT AGCTCCGGCG
GTGGCGGCGG TACTGTGGAT CTTCCTGTTT AACCCCGGCC TGGGGCTGAT TACTCATTTC
CTTAACGGAC TGGGCTACAA CTGGAACCAC GCACAGAACA GTGGGCAAGC GATGTTCCTG
GTGGTGCTGG CTTCGGTCTG GCAGCAAATC AGCTACAACT TCCTGTTTTT CCTGGCGGCA
TTACAGTCCA TTCCCCGATC GCTGGTGGAA GCGGCGGCTA TCGACGGTGC CGGCCCGGTG
CGGCGTTTCT TCAATCTGGT GCTGCCGTTG ATCACGCCGG TGAGCTTCTT CCTGCTGGTG
GTGAATTTGG TGTACGCCTT CTTCGACACT TTCCCGGTGA TCGATGCCGC GACCGGCGGC
GGGCCGGTGC AGTCCACGAC CACGCTGATC TACAAGATCT ACCGTGAAGG CTTTGCCGGT
CTGGACTTGT CCAGCTCTGC GGCGCAGTCG GTGATCCTGA TGCTGCTGGT GATTGGCCTG
ACGGTGATCC AGTTCCGTTT TGTCGAACGT AAGGTGCGTT ACCAATGA
 
Protein sequence
MSSSRPGFGC SWLPYVLVLP QLLITAIFFL WPAGEALWYS VQSLDPFGLS SQFVGLDNFT 
QLFQDPYYLD SFYTTLIFSF LVAGIGLVVS LFFAALVDYV LRGSRIYQTL MILPYAVAPA
VAAVLWIFLF NPGLGLITHF LNGLGYNWNH AQNSGQAMFL VVLASVWQQI SYNFLFFLAA
LQSIPRSLVE AAAIDGAGPV RRFFNLVLPL ITPVSFFLLV VNLVYAFFDT FPVIDAATGG
GPVQSTTTLI YKIYREGFAG LDLSSSAAQS VILMLLVIGL TVIQFRFVER KVRYQ