More than 300 homologs were found in PanDaTox collection
for query gene Ajs_3305 on replicon NC_008782
Organism: Acidovorax sp. JS42



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008782  Ajs_3305  binding-protein-dependent transport systems inner membrane component  100 
 
 
300 aa  601  1.0000000000000001e-171  Acidovorax sp. JS42  Bacteria  normal  0.980927  normal 
 
 
-
 
NC_011992  Dtpsy_2658  binding-protein-dependent transport systems inner membrane component  99 
 
 
300 aa  597  1e-169  Acidovorax ebreus TPSY  Bacteria  decreased coverage  0.00312349  n/a   
 
 
-
 
NC_010002  Daci_5305  binding-protein-dependent transport systems inner membrane component  85.23 
 
 
298 aa  475  1e-133  Delftia acidovorans SPH-1  Bacteria  normal  normal  0.688973 
 
 
-
 
NC_008751  Dvul_0223  binding-protein-dependent transport systems inner membrane component  62.28 
 
 
293 aa  374  1e-102  Desulfovibrio vulgaris DP4  Bacteria  normal  normal 
 
 
-
 
NC_008043  TM1040_3215  binding-protein-dependent transport systems inner membrane component  63.73 
 
 
291 aa  358  6e-98  Ruegeria sp. TM1040  Bacteria  normal  normal 
 
 
-
 
NC_011769  DvMF_0657  binding-protein-dependent transport systems inner membrane component  62.54 
 
 
297 aa  353  2e-96  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.235569 
 
 
-
 
NC_012669  Bcav_2847  binding-protein-dependent transport systems inner membrane component  56.25 
 
 
305 aa  331  9e-90  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.661532 
 
 
-
 
NC_013421  Pecwa_0841  binding-protein-dependent transport systems inner membrane component  40.49 
 
 
290 aa  203  2e-51  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_0627  binding-protein-dependent transport systems inner membrane component  40.14 
 
 
290 aa  202  5e-51  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_3266  binding-protein-dependent transport systems inner membrane component  39.01 
 
 
290 aa  197  2.0000000000000003e-49  Dickeya dadantii Ech703  Bacteria  normal  0.221371  n/a   
 
 
-
 
NC_012793  GWCH70_1390  binding-protein-dependent transport systems inner membrane component  35.25 
 
 
308 aa  187  2e-46  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_0481  binding-protein-dependent transport systems inner membrane component  36.43 
 
 
310 aa  187  2e-46  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_6753  binding-protein-dependent transport systems inner membrane component  40.77 
 
 
310 aa  187  3e-46  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.114113  n/a   
 
 
-
 
NC_013235  Namu_3848  binding-protein-dependent transport systems inner membrane component  35.79 
 
 
320 aa  186  4e-46  Nakamurella multipartita DSM 44233  Bacteria  normal  0.0230008  normal  0.429544 
 
 
-
 
NC_007958  RPD_3149  binding-protein-dependent transport systems inner membrane component  38.49 
 
 
315 aa  186  6e-46  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.0566553  normal  0.330059 
 
 
-
 
NC_007778  RPB_0176  binding-protein dependent transport system inner membrane protein  37.97 
 
 
314 aa  184  1.0000000000000001e-45  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_011899  Hore_20620  binding-protein-dependent transport systems inner membrane component  31.49 
 
 
299 aa  184  1.0000000000000001e-45  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_0630  glycerol-3-phosphate ABC transporter, permease protein, putative  36.43 
 
 
310 aa  183  3e-45  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A0604  putative glycerol-3-phosphate ABC transporter, permease protein  36.43 
 
 
310 aa  183  3e-45  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A0698  putative glycerol-3-phosphate ABC transporter, permease protein  36.43 
 
 
310 aa  183  3e-45  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B4735  putative glycerol-3-phosphate ABC transporter, permease protein  36.43 
 
 
310 aa  183  3e-45  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_006274  BCZK0480  glycerol-3-phosphate ABC transporter, permease  36.43 
 
 
310 aa  183  4.0000000000000006e-45  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_0623  putative glycerol-3-phosphate ABC transporter, permease protein  36.43 
 
 
310 aa  183  4.0000000000000006e-45  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_005945  BAS0536  glycerol-3-phosphate ABC transporter permease  36.07 
 
 
310 aa  181  2e-44  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_0478  glycerol-3-phosphate ABC transporter, permease  36.07 
 
 
310 aa  180  2e-44  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_0567  glycerol-3-phosphate ABC transporter permease protein  36.07 
 
 
310 aa  181  2e-44  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2208  binding-protein-dependent transport systems inner membrane component  35.64 
 
 
306 aa  181  2e-44  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.739705  n/a   
 
 
-
 
NC_009667  Oant_1668  binding-protein-dependent transport systems inner membrane component  33.78 
 
 
310 aa  179  4e-44  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_012850  Rleg_3429  binding-protein-dependent transport systems inner membrane component  36.75 
 
 
307 aa  179  4.999999999999999e-44  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_004311  BRA1182  sugar ABC transporter, permease protein, putative  35.46 
 
 
319 aa  177  1e-43  Brucella suis 1330  Bacteria  normal  0.547049  n/a   
 
 
-
 
NC_009504  BOV_A1085  putative sugar ABC transporter, permease protein  35.46 
 
 
319 aa  177  2e-43  Brucella ovis ATCC 25840  Bacteria  normal  0.589946  n/a   
 
 
-
 
NC_014213  Mesil_3421  binding-protein-dependent transport systems inner membrane component  34.25 
 
 
307 aa  176  3e-43  Meiothermus silvanus DSM 9946  Bacteria  normal  0.556907  normal 
 
 
-
 
NC_012912  Dd1591_3382  binding-protein-dependent transport systems inner membrane component  38.55 
 
 
290 aa  176  3e-43  Dickeya zeae Ech1591  Bacteria  normal  0.514043  n/a   
 
 
-
 
NC_014213  Mesil_3227  extracellular solute-binding protein family 1  34.25 
 
 
307 aa  176  3e-43  Meiothermus silvanus DSM 9946  Bacteria  decreased coverage  0.00159401  normal  0.987884 
 
 
-
 
NC_007413  Ava_0461  binding-protein dependent transport system inner membrane protein  35.59 
 
 
301 aa  175  8e-43  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.0667876 
 
 
-
 
NC_009939  Dgeo_2918  ABC-type sugar transport system, permease component  36.05 
 
 
305 aa  174  1.9999999999999998e-42  Deinococcus geothermalis DSM 11300  Bacteria  n/a    n/a   
 
 
-
 
NC_011004  Rpal_0131  binding-protein-dependent transport systems inner membrane component  35.47 
 
 
319 aa  172  3.9999999999999995e-42  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.128042  n/a   
 
 
-
 
NC_013526  Tter_2292  binding-protein-dependent transport systems inner membrane component  36.96 
 
 
306 aa  172  5e-42  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_0295  binding-protein-dependent transport systems inner membrane component  38.3 
 
 
306 aa  172  5e-42  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.0472746 
 
 
-
 
NC_012669  Bcav_1699  binding-protein-dependent transport systems inner membrane component  35.49 
 
 
315 aa  172  7.999999999999999e-42  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.258357  normal 
 
 
-
 
NC_012669  Bcav_0321  binding-protein-dependent transport systems inner membrane component  33.22 
 
 
316 aa  172  7.999999999999999e-42  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_009667  Oant_0639  binding-protein-dependent transport systems inner membrane component  37.04 
 
 
305 aa  171  1e-41  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.371496  n/a   
 
 
-
 
NC_010511  M446_6662  binding-protein-dependent transport systems inner membrane component  38.66 
 
 
288 aa  171  2e-41  Methylobacterium sp. 4-46  Bacteria  normal  0.256172  normal  0.0292677 
 
 
-
 
NC_002977  MCA1942  sugar ABC transporter, permease protein  41.7 
 
 
287 aa  169  4e-41  Methylococcus capsulatus str. Bath  Bacteria  normal  n/a   
 
 
-
 
NC_008262  CPR_0905  transmembrane permease MsmF  32.97 
 
 
289 aa  169  4e-41  Clostridium perfringens SM101  Bacteria  normal  0.0122469  n/a   
 
 
-
 
NC_012669  Bcav_1506  binding-protein-dependent transport systems inner membrane component  39.29 
 
 
319 aa  169  6e-41  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.172357  normal 
 
 
-
 
NC_013172  Bfae_29020  carbohydrate ABC transporter membrane protein  34.64 
 
 
275 aa  169  7e-41  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013205  Aaci_2047  binding-protein-dependent transport systems inner membrane component  32.99 
 
 
294 aa  168  8e-41  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.550241  n/a   
 
 
-
 
NC_012669  Bcav_1523  binding-protein-dependent transport systems inner membrane component  37.02 
 
 
321 aa  168  1e-40  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_3982  binding-protein-dependent transport systems inner membrane component  36.01 
 
 
316 aa  166  5e-40  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_011368  Rleg2_5350  binding-protein-dependent transport systems inner membrane component  33.99 
 
 
308 aa  166  5.9999999999999996e-40  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.84186  normal  0.48209 
 
 
-
 
NC_010816  BLD_1549  MalF-type ABC sugar transport systems permease component  33.33 
 
 
317 aa  165  9e-40  Bifidobacterium longum DJO10A  Bacteria  normal  0.649517  n/a   
 
 
-
 
NC_011881  Achl_4622  binding-protein-dependent transport systems inner membrane component  34.22 
 
 
317 aa  164  1.0000000000000001e-39  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_011661  Dtur_0382  binding-protein-dependent transport systems inner membrane component  32.92 
 
 
296 aa  164  2.0000000000000002e-39  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_1151  binding-protein-dependent transport systems inner membrane component  37.45 
 
 
314 aa  164  2.0000000000000002e-39  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.59424  n/a   
 
 
-
 
NC_013205  Aaci_0077  binding-protein-dependent transport systems inner membrane component  33.69 
 
 
311 aa  163  3e-39  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_008262  CPR_0477  ABC tranporter, permease protein  32.28 
 
 
315 aa  162  4.0000000000000004e-39  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_0016  binding-protein-dependent transport systems inner membrane component  33.45 
 
 
311 aa  163  4.0000000000000004e-39  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.17058  normal 
 
 
-
 
NC_009616  Tmel_0691  binding-protein-dependent transport systems inner membrane component  31.05 
 
 
295 aa  162  7e-39  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_03080  permease component of ABC-type sugar transporter  36.36 
 
 
322 aa  162  9e-39  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.151535  normal 
 
 
-
 
NC_010184  BcerKBAB4_2801  binding-protein-dependent transport systems inner membrane component  34.04 
 
 
288 aa  161  1e-38  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.254018  n/a   
 
 
-
 
NC_011369  Rleg2_1771  binding-protein-dependent transport systems inner membrane component  37.23 
 
 
307 aa  160  2e-38  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.2153  normal  0.0141948 
 
 
-
 
NC_012669  Bcav_3573  binding-protein-dependent transport systems inner membrane component  34.72 
 
 
353 aa  160  2e-38  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.500594  normal 
 
 
-
 
NC_013526  Tter_2523  binding-protein-dependent transport systems inner membrane component  34.98 
 
 
309 aa  160  2e-38  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.00000000325465  n/a   
 
 
-
 
NC_011831  Cagg_2193  binding-protein-dependent transport systems inner membrane component  34.32 
 
 
306 aa  161  2e-38  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.692762  normal 
 
 
-
 
NC_013526  Tter_2573  binding-protein-dependent transport systems inner membrane component  35.07 
 
 
309 aa  160  3e-38  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_2365  sugar ABC transporter, permease protein  36.36 
 
 
288 aa  160  4e-38  Streptosporangium roseum DSM 43021  Bacteria  normal  0.216835  normal 
 
 
-
 
NC_011884  Cyan7425_3980  binding-protein-dependent transport systems inner membrane component  34.22 
 
 
299 aa  159  4e-38  Cyanothece sp. PCC 7425  Bacteria  normal  hitchhiker  0.00655631 
 
 
-
 
NC_011981  Avi_7592  ABC transporter  31.67 
 
 
306 aa  159  7e-38  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_011661  Dtur_0377  binding-protein-dependent transport systems inner membrane component  30.9 
 
 
294 aa  158  9e-38  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_3002  binding-protein-dependent transport systems inner membrane component  33.45 
 
 
320 aa  158  1e-37  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_012848  Rleg_4750  binding-protein-dependent transport systems inner membrane component  34.48 
 
 
299 aa  157  1e-37  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.62916  normal  0.701692 
 
 
-
 
NC_013526  Tter_2615  binding-protein-dependent transport systems inner membrane component  36.63 
 
 
307 aa  158  1e-37  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.0000296099  n/a   
 
 
-
 
NC_009523  RoseRS_1357  binding-protein-dependent transport systems inner membrane component  32.57 
 
 
316 aa  158  1e-37  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_014248  Aazo_4983  binding-protein-dependent transporter inner membrane protein  31.25 
 
 
310 aa  157  3e-37  'Nostoc azollae' 0708  Bacteria  normal  0.300856  n/a   
 
 
-
 
NC_013526  Tter_2000  binding-protein-dependent transport systems inner membrane component  36.7 
 
 
319 aa  156  3e-37  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_4882  binding-protein-dependent transport systems inner membrane component  33.58 
 
 
313 aa  156  3e-37  Conexibacter woesei DSM 14684  Bacteria  normal  0.115668  normal 
 
 
-
 
NC_012669  Bcav_3990  binding-protein-dependent transport systems inner membrane component  34.32 
 
 
317 aa  157  3e-37  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_011899  Hore_15550  binding-protein-dependent transport systems inner membrane component  35.48 
 
 
294 aa  156  4e-37  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_0774  binding-protein-dependent transport systems inner membrane component  34.06 
 
 
293 aa  156  4e-37  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_3651  binding-protein-dependent transport systems inner membrane component  33.56 
 
 
301 aa  156  5.0000000000000005e-37  Acidovorax citrulli AAC00-1  Bacteria  normal  0.0332234  normal 
 
 
-
 
NC_012669  Bcav_2833  binding-protein-dependent transport systems inner membrane component  32.32 
 
 
319 aa  155  5.0000000000000005e-37  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0200859  normal 
 
 
-
 
NC_013172  Bfae_29410  carbohydrate ABC transporter membrane protein  34.16 
 
 
322 aa  155  5.0000000000000005e-37  Brachybacterium faecium DSM 4810  Bacteria  normal  0.899558  n/a   
 
 
-
 
NC_010003  Pmob_0955  binding-protein-dependent transport systems inner membrane component  35.62 
 
 
291 aa  155  5.0000000000000005e-37  Petrotoga mobilis SJ95  Bacteria  normal  0.0196347  n/a   
 
 
-
 
NC_011368  Rleg2_4663  binding-protein-dependent transport systems inner membrane component  33.45 
 
 
299 aa  155  6e-37  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.456499 
 
 
-
 
NC_009523  RoseRS_4568  binding-protein-dependent transport systems inner membrane component  32.71 
 
 
352 aa  155  6e-37  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_009767  Rcas_0115  binding-protein-dependent transport systems inner membrane component  36.86 
 
 
303 aa  155  6e-37  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.013229  normal 
 
 
-
 
NC_008048  Sala_1022  binding-protein-dependent transport systems inner membrane component  35.46 
 
 
294 aa  155  7e-37  Sphingopyxis alaskensis RB2256  Bacteria  normal  normal 
 
 
-
 
NC_013526  Tter_2041  binding-protein-dependent transport systems inner membrane component  32.49 
 
 
305 aa  155  8e-37  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.00457854  n/a   
 
 
-
 
NC_013526  Tter_2527  binding-protein-dependent transport systems inner membrane component  32.5 
 
 
309 aa  155  1e-36  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.849073  n/a   
 
 
-
 
NC_012848  Rleg_5053  binding-protein-dependent transport systems inner membrane component  33.57 
 
 
318 aa  154  1e-36  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.0625824  normal 
 
 
-
 
NC_013595  Sros_8235  ABC transporter, permease protein  33.33 
 
 
306 aa  154  1e-36  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_011981  Avi_7347  ABC transporter membrane spanning protein (sugar)  32.86 
 
 
320 aa  154  1e-36  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_011368  Rleg2_5336  binding-protein-dependent transport systems inner membrane component  33.57 
 
 
318 aa  154  1e-36  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.949955  normal 
 
 
-
 
NC_013526  Tter_2217  binding-protein-dependent transport systems inner membrane component  33.88 
 
 
305 aa  154  2e-36  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_4634  binding-protein-dependent transport systems inner membrane component  34.28 
 
 
292 aa  154  2e-36  Nocardioides sp. JS614  Bacteria  normal  0.219562  n/a   
 
 
-
 
NC_007604  Synpcc7942_0526  ABC-type sugar transport systems permease components-like  33.58 
 
 
293 aa  153  2.9999999999999998e-36  Synechococcus elongatus PCC 7942  Bacteria  normal  normal 
 
 
-
 
NC_010524  Lcho_3242  binding-protein-dependent transport systems inner membrane component  33.33 
 
 
317 aa  153  2.9999999999999998e-36  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_010002  Daci_5466  binding-protein-dependent transport systems inner membrane component  32.99 
 
 
293 aa  153  2.9999999999999998e-36  Delftia acidovorans SPH-1  Bacteria  normal  0.0543502  normal 
 
 
-
 
NC_010003  Pmob_0288  binding-protein-dependent transport systems inner membrane component  29.82 
 
 
290 aa  153  2.9999999999999998e-36  Petrotoga mobilis SJ95  Bacteria  hitchhiker  0.00066862  n/a   
 
 
-
 
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