| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_7592 |
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| Symbol | |
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| ID | 7380250 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011981 |
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| Strand | - |
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| Start bp | 537439 |
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| End bp | 538359 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 643641602 |
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| Product | ABC transporter |
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| Protein accession | YP_002539899 |
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| Protein GI | 222102860 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1175] ABC-type sugar transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGTCTC TGTCTGAGCT GCACTCCCAA TCGTCTGCAG CCGCCTCGAA GCGCTTCAGT
TATGCCGCCA TTGCGCATCT CTTCGCGGCC CCGGCCTTCC TGCTGCTAAT CGCAACGGTG
GTTGCGCCGA TCTTCGTTGT GGTCCTGATC AGCTTGACCG ATTATCGCCT CGGTCGGCTC
ACCTTGAATT TTGTCGGCCT CGGCAACTAT GTCAGAATGA TCAATGACCC GTTCTTCTGG
GCGGCCCTGC GCAACAGCGC ACTCTATACG GCAATTGTCG TGCCGGTATC GGTGTTCGGT
GCGCTGTGCG TTGCCGTGCT GCTTGATGGT CGCCGTCGCT CGCGACGTTT CTACGAGATC
GTCTATTTTC TGCCGGTCAC CTCCACATTG ACGGCCATGT CCATTGTCTG GAGCTATCTG
CTCAATGGCC ATATCGGGCC GCTGGCAAGC CTGTTGGACG CATTGGGCTT ACCGGCTCTC
GATTTTTTTG CCGATGGAAC ACTTGCGTTG ATCGGCCTTG CCATCATCGG CATCTGGCAT
CTGTTTGGCT TCAATCTGAT CCTGTTTCTG GCGGGGCTCA CGGTCCTATC GGCCGAGCTG
AAGGAGGCGT CTGCTCTGGA TGGAATGGAC GGCTTTTGCG ACCGGCTGCG TTACCTGACC
TGGCCGCTTC TGGCTCCTAC GACCATCGTG GTTGTCGTGT TGAGCTGCAT ACAGTCATTT
CAGGTCTTCG ACACGGTGGC GGTTCTGACC AATGGTGGCC CCTATGGCGC GACTGAAATG
CTGCTGCACA AGATCAACAC GGATACGTTC ACAGGCCTGA AAGCCGGTTA TGGCAGCGCG
CTAACTGTCG TCTATCTCCT GTTGATCGGG ACATTTTCAA TCGTCCACGT CGGCTTAAGC
AACAGAAAGG CGCATTTTTG A
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| Protein sequence | MTSLSELHSQ SSAAASKRFS YAAIAHLFAA PAFLLLIATV VAPIFVVVLI SLTDYRLGRL
TLNFVGLGNY VRMINDPFFW AALRNSALYT AIVVPVSVFG ALCVAVLLDG RRRSRRFYEI
VYFLPVTSTL TAMSIVWSYL LNGHIGPLAS LLDALGLPAL DFFADGTLAL IGLAIIGIWH
LFGFNLILFL AGLTVLSAEL KEASALDGMD GFCDRLRYLT WPLLAPTTIV VVVLSCIQSF
QVFDTVAVLT NGGPYGATEM LLHKINTDTF TGLKAGYGSA LTVVYLLLIG TFSIVHVGLS
NRKAHF
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