| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_3266 |
|---|
| Symbol | |
|---|
| ID | 8089212 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya dadantii Ech703 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012880 |
|---|
| Strand | + |
|---|
| Start bp | 3826528 |
|---|
| End bp | 3827400 |
|---|
| Gene Length | 873 bp |
|---|
| Protein Length | 290 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 644837338 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_002988850 |
|---|
| Protein GI | 242240669 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1175] ABC-type sugar transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.221371 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGAAAAC ACTGGCTACC CTGGCTGATC CTGGCGCCCT CCCTCTTGTT CTTGGTGTTG
TTTACCTACT TTCCGTTATT CCGTTCGGTA TACGACAGCC TGTTCGACAC TCGTATGGCG
GGCGATACCG CCCTGTTTGT CGGCGCAGGT AACTTTATCC GCCTATTTGA TGACCAGGTA
TTCTGGCGCG CGCTGTTCAA CAATCTGGCC TACATCCTAC TGACGGTCAT CCCCGGCATC
GTACTGTCGT TGCTGCTCGC CGTGGCGCTA TGGGAAAACC ACGCAGTAAA CCGCTGGCTG
CGAACCGCCT TTTTCTTTCC CATGATCATT CCGATGGTCA GCGCTGCCGC GTTGTGGCTA
TTCATCTTTA TGCCGGGCAT CGGGCTGCTG GACTATTACC TGGCCAAACT CTTCGGCCCG
ATGAACAACA ATTACCTCGG CCACAGCAAC AGCGCACTGT TCGCTCTGGC CATTATCGGC
GTGTGGAAAT TTGCCGGTTA TTACATGCTG TTCTTCCTCG CCGGGTTACA GGGCATCCCC
CCATCCACCC GCGAGGCCGC AGTGATGGAA GGCGCGACAT CGGTACAGAT CTTTTTTCGC
GTCACGCTGC CCTTACTGCG CCCTACCCTC AGCTTTGTGC TGACGACCGC GCTGATTTAC
TCCGTCACCC AGATTGATCA CGTCGCGGTG ATGACGCATG GCGGCCCGGA CAACGCCACC
ACGGTGCTGC TCTATTACAT CCAGAATCTC GCCTGGGATA CCCACGATCT GGGCAAGGCT
TCAGCCGCGA CGTTCCTGAC GTTGGCGGGG CTGTTCATCT TTTCCCTGAT TAACCTAAAA
GTGCTTGAGA AAGGGGCACA TTATGAGCGT TGA
|
|---|
| Protein sequence | MRKHWLPWLI LAPSLLFLVL FTYFPLFRSV YDSLFDTRMA GDTALFVGAG NFIRLFDDQV
FWRALFNNLA YILLTVIPGI VLSLLLAVAL WENHAVNRWL RTAFFFPMII PMVSAAALWL
FIFMPGIGLL DYYLAKLFGP MNNNYLGHSN SALFALAIIG VWKFAGYYML FFLAGLQGIP
PSTREAAVME GATSVQIFFR VTLPLLRPTL SFVLTTALIY SVTQIDHVAV MTHGGPDNAT
TVLLYYIQNL AWDTHDLGKA SAATFLTLAG LFIFSLINLK VLEKGAHYER
|
|---|
| |