Gene Bcav_2847 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_2847 
Symbol 
ID7860378 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp3181555 
End bp3182472 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content68% 
IMG OID643866944 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_002882854 
Protein GI229821328 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1175] ABC-type sugar transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.661532 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCCAGG TCATCGACGT CGTCGCCGAG GCGACCCACG GCGTGCCCCG TCGCGAGCGC 
ACCGCCCGGG CGCGCGACAC GGCGTTCGCG TGGGCGCTGC TCGCGCCCGC GTTCCTCGTG
CTCGTCGCGT TCACGCACTA CCCCGTGATC TCCTCGGTGC TCGCCAGCAC CGAGGAGCGC
GGCGGGGACC GCGGGTTCGC GAACTACGAG CGGATGATCA ACGACCCCGT GTTCTGGAAG
GTCGTGGTCA ACAACATCTG GTTCGCGCTG GGCACGGTCC CGACGTCGAT GGCGCTCGCG
ATCCTCATGG CCGTCTGGGT GAACGGGAAG CTGAAGGGGC GTGGCTTCGT CCGCCTCGCG
TACTTCACCC CCACGATCCT GCCGATGGTC GCCGTCGCCA GCATCTGGCT CTTCTTCTAC
TCCCCCGGCA TCGGACCGAT CGACCAGCTG CTCACCTGGG TGGGCCTGCC GACCCGCAAC
TGGCTCGGGG ACCCGTCGAC GGCGATGCCC GCGCTGATGG TCATGATGAT CTGGAAGCTG
GCGGGCTTCT TCATGATCTT CTACCTGGCC GGGCTGCAGA GCCTCTCCCC CGAGCTCGAG
GAGGCGTCGA CCCTCGAGGG CGCGTCGCGG TGGTACCACT TCCGGCGTGT GACGTTCCCG
CTGCTCGCCC CGACCACGCT GTTCGTGTTC GTCGTGGCCG TGACGGACGC GTTCAAGATC
ATCGACCACC TGTTCATCAT GACGAGCGGC GGCCCCAACA ACGCCACCAA CCTGCTGCTC
TACTACATCT ACGACACCGC GTTCACGTTC TTCGACCCTG GCTACGCCGG AGCGCTCACG
CTGGCGCTCG TGGTGATCCT CGGCGTCGTC GCCGTCGTGC AGTTCGGCGT CCTCGAGCGG
CGGGTGCACT ACCGATGA
 
Protein sequence
MAQVIDVVAE ATHGVPRRER TARARDTAFA WALLAPAFLV LVAFTHYPVI SSVLASTEER 
GGDRGFANYE RMINDPVFWK VVVNNIWFAL GTVPTSMALA ILMAVWVNGK LKGRGFVRLA
YFTPTILPMV AVASIWLFFY SPGIGPIDQL LTWVGLPTRN WLGDPSTAMP ALMVMMIWKL
AGFFMIFYLA GLQSLSPELE EASTLEGASR WYHFRRVTFP LLAPTTLFVF VVAVTDAFKI
IDHLFIMTSG GPNNATNLLL YYIYDTAFTF FDPGYAGALT LALVVILGVV AVVQFGVLER
RVHYR