More than 300 homologs were found in PanDaTox collection
for query gene Daci_5305 on replicon NC_010002
Organism: Delftia acidovorans SPH-1



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010002  Daci_5305  binding-protein-dependent transport systems inner membrane component  100 
 
 
298 aa  593  1e-169  Delftia acidovorans SPH-1  Bacteria  normal  normal  0.688973 
 
 
-
 
NC_008782  Ajs_3305  binding-protein-dependent transport systems inner membrane component  85.23 
 
 
300 aa  478  1e-134  Acidovorax sp. JS42  Bacteria  normal  0.980927  normal 
 
 
-
 
NC_011992  Dtpsy_2658  binding-protein-dependent transport systems inner membrane component  85.57 
 
 
300 aa  477  1e-134  Acidovorax ebreus TPSY  Bacteria  decreased coverage  0.00312349  n/a   
 
 
-
 
NC_008751  Dvul_0223  binding-protein-dependent transport systems inner membrane component  64.69 
 
 
293 aa  382  1e-105  Desulfovibrio vulgaris DP4  Bacteria  normal  normal 
 
 
-
 
NC_011769  DvMF_0657  binding-protein-dependent transport systems inner membrane component  66.79 
 
 
297 aa  367  1e-101  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.235569 
 
 
-
 
NC_008043  TM1040_3215  binding-protein-dependent transport systems inner membrane component  61.51 
 
 
291 aa  364  1e-99  Ruegeria sp. TM1040  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_2847  binding-protein-dependent transport systems inner membrane component  57.09 
 
 
305 aa  338  7e-92  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.661532 
 
 
-
 
NC_013421  Pecwa_0841  binding-protein-dependent transport systems inner membrane component  41.03 
 
 
290 aa  205  9e-52  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_0627  binding-protein-dependent transport systems inner membrane component  40.34 
 
 
290 aa  202  7e-51  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_012793  GWCH70_1390  binding-protein-dependent transport systems inner membrane component  36.33 
 
 
308 aa  194  1e-48  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_3266  binding-protein-dependent transport systems inner membrane component  39.72 
 
 
290 aa  194  2e-48  Dickeya dadantii Ech703  Bacteria  normal  0.221371  n/a   
 
 
-
 
NC_007778  RPB_0176  binding-protein dependent transport system inner membrane protein  40.74 
 
 
314 aa  193  4e-48  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_6753  binding-protein-dependent transport systems inner membrane component  41.52 
 
 
310 aa  192  7e-48  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.114113  n/a   
 
 
-
 
NC_013526  Tter_2208  binding-protein-dependent transport systems inner membrane component  36.81 
 
 
306 aa  190  2e-47  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.739705  n/a   
 
 
-
 
NC_010184  BcerKBAB4_0481  binding-protein-dependent transport systems inner membrane component  35.64 
 
 
310 aa  189  5e-47  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_007958  RPD_3149  binding-protein-dependent transport systems inner membrane component  37.82 
 
 
315 aa  189  5.999999999999999e-47  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.0566553  normal  0.330059 
 
 
-
 
NC_003909  BCE_0630  glycerol-3-phosphate ABC transporter, permease protein, putative  35.99 
 
 
310 aa  187  1e-46  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_004311  BRA1182  sugar ABC transporter, permease protein, putative  36.24 
 
 
319 aa  187  1e-46  Brucella suis 1330  Bacteria  normal  0.547049  n/a   
 
 
-
 
NC_011658  BCAH187_A0698  putative glycerol-3-phosphate ABC transporter, permease protein  35.99 
 
 
310 aa  187  1e-46  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_009667  Oant_1668  binding-protein-dependent transport systems inner membrane component  35.15 
 
 
310 aa  188  1e-46  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B4735  putative glycerol-3-phosphate ABC transporter, permease protein  35.99 
 
 
310 aa  188  1e-46  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_011725  BCB4264_A0604  putative glycerol-3-phosphate ABC transporter, permease protein  35.64 
 
 
310 aa  187  2e-46  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_009504  BOV_A1085  putative sugar ABC transporter, permease protein  36.24 
 
 
319 aa  187  2e-46  Brucella ovis ATCC 25840  Bacteria  normal  0.589946  n/a   
 
 
-
 
NC_006274  BCZK0480  glycerol-3-phosphate ABC transporter, permease  35.64 
 
 
310 aa  187  3e-46  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_0623  putative glycerol-3-phosphate ABC transporter, permease protein  35.64 
 
 
310 aa  187  3e-46  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_005945  BAS0536  glycerol-3-phosphate ABC transporter permease  35.29 
 
 
310 aa  185  8e-46  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_0567  glycerol-3-phosphate ABC transporter permease protein  35.29 
 
 
310 aa  185  8e-46  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_0478  glycerol-3-phosphate ABC transporter, permease  35.29 
 
 
310 aa  184  1.0000000000000001e-45  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_014213  Mesil_3227  extracellular solute-binding protein family 1  34.59 
 
 
307 aa  184  1.0000000000000001e-45  Meiothermus silvanus DSM 9946  Bacteria  decreased coverage  0.00159401  normal  0.987884 
 
 
-
 
NC_014213  Mesil_3421  binding-protein-dependent transport systems inner membrane component  34.59 
 
 
307 aa  184  1.0000000000000001e-45  Meiothermus silvanus DSM 9946  Bacteria  normal  0.556907  normal 
 
 
-
 
NC_011899  Hore_20620  binding-protein-dependent transport systems inner membrane component  32.28 
 
 
299 aa  184  2.0000000000000003e-45  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_013235  Namu_3848  binding-protein-dependent transport systems inner membrane component  34.59 
 
 
320 aa  183  3e-45  Nakamurella multipartita DSM 44233  Bacteria  normal  0.0230008  normal  0.429544 
 
 
-
 
NC_012850  Rleg_3429  binding-protein-dependent transport systems inner membrane component  36.71 
 
 
307 aa  182  8.000000000000001e-45  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_013526  Tter_2292  binding-protein-dependent transport systems inner membrane component  37.09 
 
 
306 aa  182  9.000000000000001e-45  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_0295  binding-protein-dependent transport systems inner membrane component  40.29 
 
 
306 aa  181  1e-44  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.0472746 
 
 
-
 
NC_010511  M446_6662  binding-protein-dependent transport systems inner membrane component  41.86 
 
 
288 aa  180  2.9999999999999997e-44  Methylobacterium sp. 4-46  Bacteria  normal  0.256172  normal  0.0292677 
 
 
-
 
NC_013205  Aaci_2047  binding-protein-dependent transport systems inner membrane component  35.27 
 
 
294 aa  180  2.9999999999999997e-44  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.550241  n/a   
 
 
-
 
NC_009939  Dgeo_2918  ABC-type sugar transport system, permease component  37.54 
 
 
305 aa  179  5.999999999999999e-44  Deinococcus geothermalis DSM 11300  Bacteria  n/a    n/a   
 
 
-
 
NC_013172  Bfae_29020  carbohydrate ABC transporter membrane protein  37.13 
 
 
275 aa  179  7e-44  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_002977  MCA1942  sugar ABC transporter, permease protein  42.12 
 
 
287 aa  178  1e-43  Methylococcus capsulatus str. Bath  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_0131  binding-protein-dependent transport systems inner membrane component  37.02 
 
 
319 aa  177  2e-43  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.128042  n/a   
 
 
-
 
NC_012912  Dd1591_3382  binding-protein-dependent transport systems inner membrane component  39.46 
 
 
290 aa  176  5e-43  Dickeya zeae Ech1591  Bacteria  normal  0.514043  n/a   
 
 
-
 
NC_013595  Sros_2365  sugar ABC transporter, permease protein  38.03 
 
 
288 aa  175  8e-43  Streptosporangium roseum DSM 43021  Bacteria  normal  0.216835  normal 
 
 
-
 
NC_012669  Bcav_1699  binding-protein-dependent transport systems inner membrane component  36.79 
 
 
315 aa  174  1.9999999999999998e-42  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.258357  normal 
 
 
-
 
NC_011661  Dtur_0382  binding-protein-dependent transport systems inner membrane component  30.1 
 
 
296 aa  172  3.9999999999999995e-42  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2000  binding-protein-dependent transport systems inner membrane component  36.79 
 
 
319 aa  172  5.999999999999999e-42  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_010816  BLD_1549  MalF-type ABC sugar transport systems permease component  33.45 
 
 
317 aa  172  6.999999999999999e-42  Bifidobacterium longum DJO10A  Bacteria  normal  0.649517  n/a   
 
 
-
 
NC_013526  Tter_2523  binding-protein-dependent transport systems inner membrane component  36.01 
 
 
309 aa  172  7.999999999999999e-42  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.00000000325465  n/a   
 
 
-
 
NC_012669  Bcav_0016  binding-protein-dependent transport systems inner membrane component  34.43 
 
 
311 aa  171  2e-41  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.17058  normal 
 
 
-
 
NC_008262  CPR_0905  transmembrane permease MsmF  32.06 
 
 
289 aa  170  2e-41  Clostridium perfringens SM101  Bacteria  normal  0.0122469  n/a   
 
 
-
 
NC_009667  Oant_0639  binding-protein-dependent transport systems inner membrane component  35.47 
 
 
305 aa  171  2e-41  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.371496  n/a   
 
 
-
 
NC_013526  Tter_2217  binding-protein-dependent transport systems inner membrane component  32.41 
 
 
305 aa  170  3e-41  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_011881  Achl_4622  binding-protein-dependent transport systems inner membrane component  35.48 
 
 
317 aa  169  6e-41  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_013739  Cwoe_3982  binding-protein-dependent transport systems inner membrane component  34.97 
 
 
316 aa  168  8e-41  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_007413  Ava_0461  binding-protein dependent transport system inner membrane protein  34.53 
 
 
301 aa  169  8e-41  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.0667876 
 
 
-
 
NC_012669  Bcav_0321  binding-protein-dependent transport systems inner membrane component  34.71 
 
 
316 aa  167  1e-40  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_4634  binding-protein-dependent transport systems inner membrane component  35.64 
 
 
292 aa  167  2e-40  Nocardioides sp. JS614  Bacteria  normal  0.219562  n/a   
 
 
-
 
NC_013205  Aaci_0077  binding-protein-dependent transport systems inner membrane component  36.43 
 
 
311 aa  167  2e-40  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_1523  binding-protein-dependent transport systems inner membrane component  36.9 
 
 
321 aa  167  2e-40  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_009972  Haur_1151  binding-protein-dependent transport systems inner membrane component  35.39 
 
 
314 aa  166  2.9999999999999998e-40  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.59424  n/a   
 
 
-
 
NC_012669  Bcav_3990  binding-protein-dependent transport systems inner membrane component  34.04 
 
 
317 aa  166  5e-40  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_1506  binding-protein-dependent transport systems inner membrane component  37.86 
 
 
319 aa  166  5.9999999999999996e-40  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.172357  normal 
 
 
-
 
NC_014165  Tbis_3250  binding-protein-dependent transporter inner membrane component  37.35 
 
 
310 aa  165  6.9999999999999995e-40  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_011981  Avi_7592  ABC transporter  34.01 
 
 
306 aa  165  8e-40  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_3651  binding-protein-dependent transport systems inner membrane component  33.9 
 
 
301 aa  164  1.0000000000000001e-39  Acidovorax citrulli AAC00-1  Bacteria  normal  0.0332234  normal 
 
 
-
 
NC_011899  Hore_15550  binding-protein-dependent transport systems inner membrane component  36.8 
 
 
294 aa  164  1.0000000000000001e-39  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_009616  Tmel_0691  binding-protein-dependent transport systems inner membrane component  31.21 
 
 
295 aa  164  1.0000000000000001e-39  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_011981  Avi_7347  ABC transporter membrane spanning protein (sugar)  34.34 
 
 
320 aa  164  2.0000000000000002e-39  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_011368  Rleg2_5350  binding-protein-dependent transport systems inner membrane component  34.28 
 
 
308 aa  164  2.0000000000000002e-39  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.84186  normal  0.48209 
 
 
-
 
NC_011884  Cyan7425_3980  binding-protein-dependent transport systems inner membrane component  36.5 
 
 
299 aa  164  2.0000000000000002e-39  Cyanothece sp. PCC 7425  Bacteria  normal  hitchhiker  0.00655631 
 
 
-
 
NC_013526  Tter_2573  binding-protein-dependent transport systems inner membrane component  36.77 
 
 
309 aa  164  2.0000000000000002e-39  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_011369  Rleg2_1771  binding-protein-dependent transport systems inner membrane component  36.68 
 
 
307 aa  164  2.0000000000000002e-39  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.2153  normal  0.0141948 
 
 
-
 
NC_013172  Bfae_29410  carbohydrate ABC transporter membrane protein  35.23 
 
 
322 aa  164  2.0000000000000002e-39  Brachybacterium faecium DSM 4810  Bacteria  normal  0.899558  n/a   
 
 
-
 
NC_012669  Bcav_3573  binding-protein-dependent transport systems inner membrane component  34.48 
 
 
353 aa  163  3e-39  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.500594  normal 
 
 
-
 
NC_008262  CPR_0477  ABC tranporter, permease protein  31.58 
 
 
315 aa  163  4.0000000000000004e-39  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_2264  binding-protein-dependent transport systems inner membrane component  33.44 
 
 
307 aa  162  7e-39  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.277747  normal 
 
 
-
 
NC_009523  RoseRS_1357  binding-protein-dependent transport systems inner membrane component  33 
 
 
316 aa  162  8.000000000000001e-39  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_010184  BcerKBAB4_2801  binding-protein-dependent transport systems inner membrane component  34.04 
 
 
288 aa  162  8.000000000000001e-39  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.254018  n/a   
 
 
-
 
NC_013411  GYMC61_2847  binding-protein-dependent transport systems inner membrane component  33.68 
 
 
318 aa  162  9e-39  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_011661  Dtur_0377  binding-protein-dependent transport systems inner membrane component  30.34 
 
 
294 aa  161  9e-39  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_010003  Pmob_0955  binding-protein-dependent transport systems inner membrane component  35.9 
 
 
291 aa  161  1e-38  Petrotoga mobilis SJ95  Bacteria  normal  0.0196347  n/a   
 
 
-
 
NC_013739  Cwoe_4882  binding-protein-dependent transport systems inner membrane component  32.72 
 
 
313 aa  160  2e-38  Conexibacter woesei DSM 14684  Bacteria  normal  0.115668  normal 
 
 
-
 
NC_011831  Cagg_2193  binding-protein-dependent transport systems inner membrane component  34.48 
 
 
306 aa  160  2e-38  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.692762  normal 
 
 
-
 
NC_008543  Bcen2424_5659  binding-protein-dependent transport systems inner membrane component  37.32 
 
 
313 aa  160  3e-38  Burkholderia cenocepacia HI2424  Bacteria  normal  0.308138  normal  0.32687 
 
 
-
 
NC_011886  Achl_3567  binding-protein-dependent transport systems inner membrane component  34.56 
 
 
309 aa  160  3e-38  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_008048  Sala_1022  binding-protein-dependent transport systems inner membrane component  36.49 
 
 
294 aa  159  4e-38  Sphingopyxis alaskensis RB2256  Bacteria  normal  normal 
 
 
-
 
NC_012848  Rleg_5053  binding-protein-dependent transport systems inner membrane component  33.57 
 
 
318 aa  159  5e-38  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.0625824  normal 
 
 
-
 
NC_011368  Rleg2_5336  binding-protein-dependent transport systems inner membrane component  33.81 
 
 
318 aa  159  6e-38  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.949955  normal 
 
 
-
 
NC_010515  Bcenmc03_4576  binding-protein-dependent transport systems inner membrane component  37.32 
 
 
314 aa  159  6e-38  Burkholderia cenocepacia MC0-3  Bacteria  normal  hitchhiker  0.00748515 
 
 
-
 
NC_008061  Bcen_5200  binding-protein-dependent transport systems inner membrane component  36.97 
 
 
313 aa  159  7e-38  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_4319  binding-protein-dependent transport systems inner membrane component  34.53 
 
 
312 aa  158  8e-38  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.778687  hitchhiker  0.00185272 
 
 
-
 
NC_009485  BBta_3986  putative ABC transporter (permease protein)  37.55 
 
 
313 aa  158  9e-38  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_009654  Mmwyl1_0774  binding-protein-dependent transport systems inner membrane component  34.69 
 
 
293 aa  158  9e-38  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_013526  Tter_2511  binding-protein-dependent transport systems inner membrane component  35.09 
 
 
317 aa  158  1e-37  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.10809  n/a   
 
 
-
 
NC_013521  Sked_03080  permease component of ABC-type sugar transporter  35.51 
 
 
322 aa  158  1e-37  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.151535  normal 
 
 
-
 
NC_010552  BamMC406_5488  binding-protein-dependent transport systems inner membrane component  37.55 
 
 
319 aa  158  1e-37  Burkholderia ambifaria MC40-6  Bacteria  normal  0.80176  hitchhiker  0.000205378 
 
 
-
 
NC_008391  Bamb_4933  binding-protein-dependent transport systems inner membrane component  37.32 
 
 
314 aa  158  1e-37  Burkholderia ambifaria AMMD  Bacteria  normal  normal  0.103484 
 
 
-
 
NC_012669  Bcav_3002  binding-protein-dependent transport systems inner membrane component  34.6 
 
 
320 aa  157  1e-37  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_014248  Aazo_4983  binding-protein-dependent transporter inner membrane protein  31.6 
 
 
310 aa  158  1e-37  'Nostoc azollae' 0708  Bacteria  normal  0.300856  n/a   
 
 
-
 
NC_013947  Snas_2734  binding-protein-dependent transport systems inner membrane component  34.27 
 
 
308 aa  157  2e-37  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.172129  normal  0.124427 
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>