More than 300 homologs were found in PanDaTox collection
for query gene Amir_1805 on replicon NC_013093
Organism: Actinosynnema mirum DSM 43827



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013093  Amir_1805  putative two component transcriptional regulator, winged helix family  100 
 
 		 170 aa  327  4e-89  Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
-
 
NC_013093  Amir_4014  putative two component transcriptional regulator, winged helix family  60.58 
 
 		 166 aa  113  1.0000000000000001e-24  Actinosynnema mirum DSM 43827  Bacteria  normal  0.572334  n/a   
 
 
-
 
NC_009380  Strop_2147  transcriptional regulator domain-containing protein  43.11 
 
 		 203 aa  100  7e-21  Salinispora tropica CNB-440  Bacteria  normal  0.162923  normal  0.29273 
 
 
-
 
NC_009953  Sare_2299  winged helix family two component response transcriptional regulator  40.7 
 
 		 203 aa  98.2  5e-20  Salinispora arenicola CNS-205  Bacteria  normal  1  hitchhiker  0.00499113 
 
 
-
 
NC_010814  Glov_0588  two component transcriptional regulator, winged helix family  51.11 
 
 		 226 aa  93.6  1e-18  Geobacter lovleyi SZ  Bacteria  normal  0.944339  n/a   
 
 
-
 
NC_010320  Teth514_0588  two component transcriptional regulator  42.99 
 
 		 227 aa  93.2  1e-18  Thermoanaerobacter sp. X514  Bacteria  unclonable  0.000000000451147  n/a   
 
 
-
 
NC_010184  BcerKBAB4_1215  two component transcriptional regulator  45.45 
 
 		 223 aa  88.6  4e-17  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.533573  n/a   
 
 
-
 
NC_011725  BCB4264_A1351  DNA-binding response regulator  44.32 
 
 		 223 aa  88.6  4e-17  Bacillus cereus B4264  Bacteria  normal  1  n/a   
 
 
-
 
NC_011772  BCG9842_B3993  DNA-binding response regulator  44.32 
 
 		 223 aa  87.4  8e-17  Bacillus cereus G9842  Bacteria  normal  1  normal  0.910988 
 
 
-
 
NC_011773  BCAH820_1389  DNA-binding response regulator  43.18 
 
 		 223 aa  86.7  1e-16  Bacillus cereus AH820  Bacteria  n/a    normal  1 
 
 
-
 
NC_005957  BT9727_1191  response regulator  43.18 
 
 		 223 aa  86.7  1e-16  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  1  n/a   
 
 
-
 
NC_006274  BCZK1193  response regulator  43.18 
 
 		 223 aa  86.7  1e-16  Bacillus cereus E33L  Bacteria  normal  1  n/a   
 
 
-
 
NC_013205  Aaci_1728  two component transcriptional regulator, winged helix family  46.81 
 
 		 233 aa  87  1e-16  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  1  n/a   
 
 
-
 
NC_003909  BCE_1413  DNA-binding response regulator  43.18 
 
 		 223 aa  85.9  2e-16  Bacillus cereus ATCC 10987  Bacteria  normal  1  n/a   
 
 
-
 
NC_005945  BAS1213  DNA-binding response regulator  43.18 
 
 		 223 aa  86.3  2e-16  Bacillus anthracis str. Sterne  Bacteria  normal  0.203275  n/a   
 
 
-
 
NC_007530  GBAA_1312  DNA-binding response regulator  43.18 
 
 		 223 aa  86.3  2e-16  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  1  n/a   
 
 
-
 
NC_011658  BCAH187_A1453  DNA-binding response regulator  43.18 
 
 		 223 aa  85.9  2e-16  Bacillus cereus AH187  Bacteria  normal  1  n/a   
 
 
-
 
NC_012918  GM21_1271  two component transcriptional regulator, winged helix family  51.11 
 
 		 225 aa  85.9  2e-16  Geobacter sp. M21  Bacteria  n/a    normal  1 
 
 
-
 
NC_008781  Pnap_2201  two component transcriptional regulator  46.59 
 
 		 242 aa  86.3  2e-16  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.153982  normal  1 
 
 
-
 
NC_011146  Gbem_2952  two component transcriptional regulator, winged helix family  51.11 
 
 		 225 aa  85.9  3e-16  Geobacter bemidjiensis Bem  Bacteria  normal  1  n/a   
 
 
-
 
NC_008752  Aave_2631  two component transcriptional regulator  44.83 
 
 		 235 aa  85.5  3e-16  Acidovorax citrulli AAC00-1  Bacteria  normal  0.552533  normal  0.0653315 
 
 
-
 
NC_007604  Synpcc7942_0556  two component transcriptional regulator  45.54 
 
 		 237 aa  85.1  4e-16  Synechococcus elongatus PCC 7942  Bacteria  normal  0.451756  normal  1 
 
 
-
 
NC_009483  Gura_1572  two component transcriptional regulator  52.63 
 
 		 225 aa  84.7  6e-16  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.000784208  n/a   
 
 
-
 
NC_008576  Mmc1_1893  two component transcriptional regulator  41.51 
 
 		 235 aa  83.6  0.000000000000001  Magnetococcus sp. MC-1  Bacteria  normal  1  normal  0.203788 
 
 
-
 
NC_009483  Gura_2556  two component transcriptional regulator  51.32 
 
 		 225 aa  83.6  0.000000000000001  Geobacter uraniireducens Rf4  Bacteria  decreased coverage  0.000000044969  n/a   
 
 
-
 
NC_002939  GSU1102  DNA-binding response regulator  53.95 
 
 		 225 aa  82.8  0.000000000000002  Geobacter sulfurreducens PCA  Bacteria  normal  1  n/a   
 
 
-
 
NC_013216  Dtox_4198  two component transcriptional regulator, winged helix family  34.4 
 
 		 226 aa  83.2  0.000000000000002  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007517  Gmet_2693  two component transcriptional regulator  53.95 
 
 		 226 aa  82.8  0.000000000000002  Geobacter metallireducens GS-15  Bacteria  normal  1  normal  0.575064 
 
 
-
 
NC_010002  Daci_4913  two component transcriptional regulator  47.13 
 
 		 231 aa  83.2  0.000000000000002  Delftia acidovorans SPH-1  Bacteria  normal  1  normal  0.121364 
 
 
-
 
NC_011992  Dtpsy_1491  two component transcriptional regulator PhoB, winged helix family  41.05 
 
 		 235 aa  83.2  0.000000000000002  Acidovorax ebreus TPSY  Bacteria  normal  1  n/a   
 
 
-
 
NC_008782  Ajs_2367  two component transcriptional regulator  41.05 
 
 		 235 aa  83.2  0.000000000000002  Acidovorax sp. JS42  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008576  Mmc1_1491  two component transcriptional regulator  41.51 
 
 		 236 aa  82  0.000000000000003  Magnetococcus sp. MC-1  Bacteria  normal  1  decreased coverage  0.00391258 
 
 
-
 
NC_013205  Aaci_2268  two component transcriptional regulator, winged helix family  49.4 
 
 		 221 aa  81.3  0.000000000000005  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  1  n/a   
 
 
-
 
NC_013501  Rmar_0993  two component transcriptional regulator, winged helix family  45.98 
 
 		 237 aa  81.3  0.000000000000005  Rhodothermus marinus DSM 4252  Bacteria  normal  1  n/a   
 
 
-
 
NC_007948  Bpro_2257  two component transcriptional regulator  44.32 
 
 		 243 aa  80.9  0.000000000000007  Polaromonas sp. JS666  Bacteria  normal  0.512842  normal  0.410356 
 
 
-
 
NC_011830  Dhaf_0940  two component transcriptional regulator, winged helix family  44.66 
 
 		 237 aa  80.9  0.000000000000008  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.324642  n/a   
 
 
-
 
NC_009674  Bcer98_1021  two component transcriptional regulator  45.12 
 
 		 223 aa  80.9  0.000000000000008  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  1  n/a   
 
 
-
 
NC_013061  Phep_2522  response regulator receiver  40.91 
 
 		 229 aa  80.5  0.00000000000001  Pedobacter heparinus DSM 2366  Bacteria  normal  0.661278  normal  1 
 
 
-
 
NC_012793  GWCH70_2675  two component transcriptional regulator, winged helix family  37.5 
 
 		 234 aa  80.1  0.00000000000001  Geobacillus sp. WCH70  Bacteria  normal  0.661044  n/a   
 
 
-
 
NC_010184  BcerKBAB4_1399  two component transcriptional regulator  44.68 
 
 		 238 aa  80.1  0.00000000000001  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.129694  n/a   
 
 
-
 
NC_003909  BCE_1601  DNA-binding response regulator ResD  44.68 
 
 		 250 aa  79.7  0.00000000000002  Bacillus cereus ATCC 10987  Bacteria  normal  0.953648  n/a   
 
 
-
 
NC_005945  BAS1386  DNA-binding response regulator ResD  44.68 
 
 		 238 aa  79.7  0.00000000000002  Bacillus anthracis str. Sterne  Bacteria  normal  1  n/a   
 
 
-
 
NC_005957  BT9727_1359  response regulator  44.68 
 
 		 238 aa  79.7  0.00000000000002  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.0319788  n/a   
 
 
-
 
NC_006274  BCZK1358  response regulator  44.68 
 
 		 238 aa  79.7  0.00000000000002  Bacillus cereus E33L  Bacteria  normal  1  n/a   
 
 
-
 
NC_011725  BCB4264_A1531  DNA-binding response regulator ResD  44.68 
 
 		 238 aa  79.7  0.00000000000002  Bacillus cereus B4264  Bacteria  normal  1  n/a   
 
 
-
 
NC_007530  GBAA_1497  DNA-binding response regulator ResD  44.68 
 
 		 238 aa  79.7  0.00000000000002  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.862661  n/a   
 
 
-
 
NC_011658  BCAH187_A1637  DNA-binding response regulator ResD  44.68 
 
 		 250 aa  79.7  0.00000000000002  Bacillus cereus AH187  Bacteria  normal  0.0246031  n/a   
 
 
-
 
NC_008010  Dgeo_2564  two component transcriptional regulator  51.81 
 
 		 244 aa  79.3  0.00000000000002  Deinococcus geothermalis DSM 11300  Bacteria  normal  1  n/a   
 
 
-
 
NC_008010  Dgeo_2598  two component transcriptional regulator  54.55 
 
 		 134 aa  79.7  0.00000000000002  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.157515  n/a   
 
 
-
 
NC_012791  Vapar_2316  two component transcriptional regulator PhoB, winged helix family  44.94 
 
 		 230 aa  79.7  0.00000000000002  Variovorax paradoxus S110  Bacteria  normal  1  n/a   
 
 
-
 
NC_011773  BCAH820_1569  DNA-binding response regulator ResD  44.68 
 
 		 250 aa  79.7  0.00000000000002  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  1.45334e-32 
 
 
-
 
NC_009718  Fnod_1490  two component transcriptional regulator  45.56 
 
 		 239 aa  79.3  0.00000000000002  Fervidobacterium nodosum Rt17-B1  Bacteria  unclonable  0.000000000120928  n/a   
 
 
-
 
NC_009253  Dred_0707  two component transcriptional regulator  46.74 
 
 		 232 aa  79.3  0.00000000000002  Desulfotomaculum reducens MI-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_011772  BCG9842_B3814  DNA-binding response regulator ResD  44.68 
 
 		 238 aa  79.7  0.00000000000002  Bacillus cereus G9842  Bacteria  normal  1  hitchhiker  3.95849e-16 
 
 
-
 
NC_004116  SAG1961  phosphate regulon response regulator PhoB  51.35 
 
 		 225 aa  79  0.00000000000003  Streptococcus agalactiae 2603V/R  Bacteria  normal  0.411469  n/a   
 
 
-
 
NC_013204  Elen_2015  putative two component transcriptional regulator, winged helix family  41.73 
 
 		 224 aa  79  0.00000000000003  Eggerthella lenta DSM 2243  Bacteria  normal  0.0839248  hitchhiker  0.0000000000000188648 
 
 
-
 
NC_013946  Mrub_0302  two component transcriptional regulator, winged helix family  50.59 
 
 		 221 aa  79  0.00000000000003  Meiothermus ruber DSM 1279  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010001  Cphy_0154  two component transcriptional regulator  38.46 
 
 		 238 aa  78.6  0.00000000000003  Clostridium phytofermentans ISDg  Bacteria  normal  0.644268  n/a   
 
 
-
 
NC_009616  Tmel_1838  two component transcriptional regulator  43.16 
 
 		 239 aa  79  0.00000000000003  Thermosipho melanesiensis BI429  Bacteria  hitchhiker  0.00000194698  n/a   
 
 
-
 
NC_014151  Cfla_3537  two component transcriptional regulator, winged helix family  51.65 
 
 		 237 aa  79  0.00000000000003  Cellulomonas flavigena DSM 20109  Bacteria  normal  1  normal  0.555413 
 
 
-
 
NC_009523  RoseRS_1397  two component transcriptional regulator  40.46 
 
 		 261 aa  79  0.00000000000003  Roseiflexus sp. RS-1  Bacteria  normal  0.0231814  hitchhiker  0.000111966 
 
 
-
 
NC_009674  Bcer98_1200  two component transcriptional regulator  42.55 
 
 		 238 aa  78.6  0.00000000000004  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  1  n/a   
 
 
-
 
NC_013132  Cpin_1224  two component transcriptional regulator, winged helix family  40.91 
 
 		 227 aa  78.6  0.00000000000004  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.0117785  hitchhiker  0.00926138 
 
 
-
 
NC_007947  Mfla_0489  two component transcriptional regulator  50.6 
 
 		 228 aa  78.6  0.00000000000004  Methylobacillus flagellatus KT  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011899  Hore_21640  two component transcriptional regulator, winged helix family  55.41 
 
 		 226 aa  78.6  0.00000000000004  Halothermothrix orenii H 168  Bacteria  hitchhiker  0.0000000000176926  n/a   
 
 
-
 
NC_014212  Mesil_0142  two component transcriptional regulator, winged helix family  50.54 
 
 		 221 aa  78.6  0.00000000000004  Meiothermus silvanus DSM 9946  Bacteria  normal  1  normal  0.709604 
 
 
-
 
NC_009675  Anae109_0415  two component transcriptional regulator  46.94 
 
 		 231 aa  78.6  0.00000000000004  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  1  normal  0.777838 
 
 
-
 
NC_005957  BT9727_4944  DNA-binding response regulator  37.5 
 
 		 223 aa  78.2  0.00000000000005  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.0109954  n/a   
 
 
-
 
NC_011886  Achl_2724  putative two component transcriptional regulator, winged helix family  53.95 
 
 		 232 aa  78.2  0.00000000000005  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.00387379 
 
 
-
 
NC_008541  Arth_3012  response regulator receiver protein  53.95 
 
 		 232 aa  78.2  0.00000000000005  Arthrobacter sp. FB24  Bacteria  normal  0.721979  n/a   
 
 
-
 
NC_002976  SERP1055  DNA-binding response regulator SrrA  43.48 
 
 		 241 aa  78.2  0.00000000000006  Staphylococcus epidermidis RP62A  Bacteria  normal  1  n/a   
 
 
-
 
NC_011830  Dhaf_4050  two component transcriptional regulator, winged helix family  46.51 
 
 		 227 aa  77.8  0.00000000000006  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.00552008  n/a   
 
 
-
 
NC_008699  Noca_2050  response regulator receiver  47.83 
 
 		 250 aa  77.8  0.00000000000006  Nocardioides sp. JS614  Bacteria  normal  1  n/a   
 
 
-
 
NC_013440  Hoch_6002  two component transcriptional regulator, winged helix family  45.83 
 
 		 243 aa  77.8  0.00000000000007  Haliangium ochraceum DSM 14365  Bacteria  normal  0.472724  normal  1 
 
 
-
 
NC_008262  CPR_2497  DNA-binding response regulator  41.76 
 
 		 228 aa  77.8  0.00000000000007  Clostridium perfringens SM101  Bacteria  normal  1  n/a   
 
 
-
 
NC_011830  Dhaf_1237  two component transcriptional regulator, winged helix family  45.98 
 
 		 234 aa  77.8  0.00000000000007  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.178035  n/a   
 
 
-
 
NC_009664  Krad_0879  putative two component transcriptional regulator, winged helix family  43.8 
 
 		 259 aa  77.8  0.00000000000007  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.249855  hitchhiker  0.00478466 
 
 
-
 
NC_009012  Cthe_3069  two component transcriptional regulator  45.05 
 
 		 230 aa  77.8  0.00000000000007  Clostridium thermocellum ATCC 27405  Bacteria  hitchhiker  0.0000000467461  n/a   
 
 
-
 
NC_013530  Xcel_3035  putative two component transcriptional regulator, winged helix family  44 
 
 		 243 aa  77.4  0.00000000000008  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  1  n/a   
 
 
-
 
NC_008261  CPF_2811  DNA-binding response regulator  41.76 
 
 		 228 aa  77.4  0.00000000000008  Clostridium perfringens ATCC 13124  Bacteria  normal  1  n/a   
 
 
-
 
NC_009012  Cthe_1600  two component transcriptional regulator  45.98 
 
 		 224 aa  77.4  0.00000000000008  Clostridium thermocellum ATCC 27405  Bacteria  hitchhiker  0.000237714  n/a   
 
 
-
 
NC_008699  Noca_3782  response regulator receiver  42.06 
 
 		 297 aa  77.4  0.00000000000009  Nocardioides sp. JS614  Bacteria  normal  1  n/a   
 
 
-
 
NC_013757  Gobs_4646  putative two component transcriptional regulator, winged helix family  39.87 
 
 		 249 aa  77.4  0.00000000000009  Geodermatophilus obscurus DSM 43160  Bacteria  normal  1  n/a   
 
 
-
 
NC_010524  Lcho_1659  two component transcriptional regulator  42.5 
 
 		 245 aa  76.6  0.0000000000001  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  1 
 
 
-
 
NC_003909  BCE_5379  DNA-binding response regulator  36.36 
 
 		 223 aa  76.6  0.0000000000001  Bacillus cereus ATCC 10987  Bacteria  normal  1  n/a   
 
 
-
 
NC_010184  BcerKBAB4_3288  two component transcriptional regulator  48.19 
 
 		 225 aa  76.6  0.0000000000001  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.0366247  n/a   
 
 
-
 
NC_006274  BCZK4959  DNA-binding response regulator  36.36 
 
 		 223 aa  76.6  0.0000000000001  Bacillus cereus E33L  Bacteria  hitchhiker  0.000160223  n/a   
 
 
-
 
NC_011891  A2cp1_0440  two component transcriptional regulator, winged helix family  47.67 
 
 		 230 aa  76.6  0.0000000000001  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_010320  Teth514_2216  two component transcriptional regulator  43.9 
 
 		 224 aa  77  0.0000000000001  Thermoanaerobacter sp. X514  Bacteria  normal  1  n/a   
 
 
-
 
NC_012793  GWCH70_2219  two component transcriptional regulator, winged helix family  44.68 
 
 		 240 aa  76.6  0.0000000000001  Geobacillus sp. WCH70  Bacteria  normal  1  n/a   
 
 
-
 
NC_013521  Sked_04930  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  50.65 
 
 		 249 aa  76.6  0.0000000000001  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.793732  normal  1 
 
 
-
 
NC_008261  CPF_0226  DNA-binding response regulator  38.2 
 
 		 223 aa  77  0.0000000000001  Clostridium perfringens ATCC 13124  Bacteria  normal  0.232655  n/a   
 
 
-
 
NC_008262  CPR_0226  DNA-binding response regulator  38.2 
 
 		 223 aa  77  0.0000000000001  Clostridium perfringens SM101  Bacteria  normal  1  n/a   
 
 
-
 
NC_010424  Daud_1897  two component transcriptional regulator  43.75 
 
 		 227 aa  77  0.0000000000001  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  0.151466  n/a   
 
 
-
 
NC_013947  Snas_0207  putative two component transcriptional regulator, winged helix family  46.32 
 
 		 180 aa  77  0.0000000000001  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.183143  normal  0.472941 
 
 
-
 
NC_008709  Ping_2232  two component transcriptional regulator, winged helix family protein  46.91 
 
 		 227 aa  76.6  0.0000000000001  Psychromonas ingrahamii 37  Bacteria  normal  0.326614  normal  0.43086 
 
 
-
 
NC_011725  BCB4264_A5385  DNA-binding response regulator  37.5 
 
 		 223 aa  77  0.0000000000001  Bacillus cereus B4264  Bacteria  normal  1  n/a   
 
 
-
 
NC_011773  BCAH820_5353  DNA-binding response regulator  36.36 
 
 		 223 aa  76.6  0.0000000000001  Bacillus cereus AH820  Bacteria  n/a    normal  1 
 
 
-
 
NC_011146  Gbem_1865  two component transcriptional regulator, winged helix family  48.68 
 
 		 226 aa  76.6  0.0000000000001  Geobacter bemidjiensis Bem  Bacteria  normal  1  n/a   
 
 
-
 
NC_011772  BCG9842_B5569  DNA-binding response regulator  37.5 
 
 		 223 aa  76.6  0.0000000000001  Bacillus cereus G9842  Bacteria  normal  1  normal  1 
 
 
-
 
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