| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_2232 |
|---|
| Symbol | |
|---|
| ID | 4624410 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychromonas ingrahamii 37 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008709 |
|---|
| Strand | - |
|---|
| Start bp | 2715549 |
|---|
| End bp | 2716232 |
|---|
| Gene Length | 684 bp |
|---|
| Protein Length | 227 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 639797370 |
|---|
| Product | two component transcriptional regulator, winged helix family protein |
|---|
| Protein accession | YP_943572 |
|---|
| Protein GI | 119945892 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | [TIGR02154] phosphate regulon transcriptional regulatory protein PhoB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.326614 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.43086 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGAGCC GTATATTAGT TGTAGAAGAT GAAGTCGCAA TCCGCGATAT GTTATGTTTT
GTATTAGACC AGCATGGTTA TGAGTGCATT GAAGCCGATA CTTATCAAAG TGCATTAAAT
CAATTACACG AACCCTATCC CGATTTGATT TTACTGGATT GGATGTTTCC GGGCGGTAGT
GGCATAAAAT TACTTAGCCA CCTCAAACAA GATAATATTT TACGCTCCAT CCCGGTCGTC
ATGTTGACCG CTCGAGGCGA AGAGCAAGAT AAAGTCAGGG GCCTGGAAAA TGGTGCGGAT
GATTATGTCA CTAAACCCTT TTCGCCTAAA GAGTTGATGG CGCGATTAAA AACAGTGATG
CGACGTGTTA ATCCAACTTC CCTCGATGAT GAATTATCCT TCAATAAGCT GAAACTCGAT
CCGGTTTCTC ATCGTGTTTC GTTGGCCGAT GAAGCATTGA ATATGGGACC AACGGAGTTT
AATTTATTAC ATTTTTTTAT GACTCATCCG GAACGCGTTT ACAGTCGTGA GCAATTGCTT
AATAATGTAT GGGGAACCAA TGTCTATGTT GAGGACCGTA CCGTAGATGT ACATATTAGA
CGACTGCGTA AAGCGTTAGC AGATCATGAT CATTTAATCC AAACCGTACG CGGTGCCGGT
TATCGCTTTT CAGTCCGTAG CTAA
|
|---|
| Protein sequence | MASRILVVED EVAIRDMLCF VLDQHGYECI EADTYQSALN QLHEPYPDLI LLDWMFPGGS
GIKLLSHLKQ DNILRSIPVV MLTARGEEQD KVRGLENGAD DYVTKPFSPK ELMARLKTVM
RRVNPTSLDD ELSFNKLKLD PVSHRVSLAD EALNMGPTEF NLLHFFMTHP ERVYSREQLL
NNVWGTNVYV EDRTVDVHIR RLRKALADHD HLIQTVRGAG YRFSVRS
|
|---|
| |