More than 300 homologs were found in PanDaTox collection
for query gene Suden_0968 on replicon NC_007575
Organism: Sulfurimonas denitrificans DSM 1251



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007575  Suden_0968  response regulator receiver domain-containing protein  100 
 
 
317 aa  627  1e-179  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  0.730939  n/a   
 
 
-
 
NC_007575  Suden_0969  response regulator receiver domain-containing protein  44.14 
 
 
328 aa  255  6e-67  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  0.749991  n/a   
 
 
-
 
NC_007575  Suden_0987  response regulator receiver domain-containing protein  41.27 
 
 
420 aa  102  6e-21  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  n/a   
 
 
-
 
NC_007575  Suden_0984  response regulator receiver/GGDEF/EAL domain-containing protein  31.14 
 
 
564 aa  95.1  1e-18  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  n/a   
 
 
-
 
NC_007575  Suden_1058  response regulator receiver domain-containing protein  40.65 
 
 
181 aa  95.1  2e-18  Sulfurimonas denitrificans DSM 1251  Bacteria  decreased coverage  0.0000718409  n/a   
 
 
-
 
NC_008346  Swol_1041  response regulator receiver protein  40.15 
 
 
365 aa  94.4  2e-18  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  n/a   
 
 
-
 
NC_013512  Sdel_2139  response regulator receiver  36.89 
 
 
236 aa  92.4  9e-18  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  n/a   
 
 
-
 
NC_008599  CFF8240_0377  DNA-binding response regulator  36.22 
 
 
226 aa  91.7  2e-17  Campylobacter fetus subsp. fetus 82-40  Bacteria  normal  0.306284  n/a   
 
 
-
 
NC_009483  Gura_4377  multi-sensor signal transduction histidine kinase  38.14 
 
 
636 aa  87.4  3e-16  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_2098  multi-sensor signal transduction histidine kinase  41.76 
 
 
547 aa  87.4  3e-16  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.000413163 
 
 
-
 
NC_012918  GM21_2096  response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)  31.34 
 
 
953 aa  87  4e-16  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.0000000000903564 
 
 
-
 
NC_009483  Gura_0876  response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)  39.45 
 
 
709 aa  86.7  5e-16  Geobacter uraniireducens Rf4  Bacteria  normal  0.0730078  n/a   
 
 
-
 
NC_007575  Suden_0964  two component transcriptional regulator  33.33 
 
 
258 aa  86.3  7e-16  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  0.412408  n/a   
 
 
-
 
NC_011146  Gbem_2120  multi-sensor signal transduction histidine kinase  37.62 
 
 
547 aa  85.9  9e-16  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_007575  Suden_0837  two component transcriptional regulator  38.64 
 
 
269 aa  85.5  0.000000000000001  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_2122  response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)  30.6 
 
 
953 aa  85.5  0.000000000000001  Geobacter bemidjiensis Bem  Bacteria  normal  0.0111685  n/a   
 
 
-
 
NC_013512  Sdel_0893  diguanylate cyclase  38.84 
 
 
566 aa  84.7  0.000000000000002  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  n/a   
 
 
-
 
NC_008787  CJJ81176_1483  DNA-binding response regulator  38.89 
 
 
226 aa  84.7  0.000000000000002  Campylobacter jejuni subsp. jejuni 81-176  Bacteria  normal  n/a   
 
 
-
 
NC_003912  CJE1664  DNA-binding response regulator  37.3 
 
 
226 aa  84  0.000000000000003  Campylobacter jejuni RM1221  Bacteria  normal  0.690265  n/a   
 
 
-
 
NC_013512  Sdel_0892  response regulator receiver  38.79 
 
 
233 aa  84  0.000000000000003  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  n/a   
 
 
-
 
NC_013512  Sdel_0363  response regulator receiver  32.54 
 
 
228 aa  83.6  0.000000000000004  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_2024  multi-sensor signal transduction histidine kinase  30.09 
 
 
517 aa  83.2  0.000000000000005  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_2195  multi-sensor signal transduction histidine kinase  28.95 
 
 
502 aa  83.2  0.000000000000005  Geobacter sp. M21  Bacteria  n/a    normal  0.067402 
 
 
-
 
NC_009802  CCC13826_0722  response regulator receiver domain-containing protein  36.89 
 
 
227 aa  82.4  0.000000000000009  Campylobacter concisus 13826  Bacteria  normal  0.0554017  n/a   
 
 
-
 
NC_009714  CHAB381_1362  DNA-binding response regulator  35.48 
 
 
225 aa  82  0.00000000000001  Campylobacter hominis ATCC BAA-381  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_3210  response regulator receiver modulated diguanylate cyclase with PAS/PAC sensor  30.33 
 
 
425 aa  81.6  0.00000000000001  Geobacter lovleyi SZ  Bacteria  normal  0.141244  n/a   
 
 
-
 
NC_009707  JJD26997_1837  DNA-binding response regulator  38.1 
 
 
226 aa  82  0.00000000000001  Campylobacter jejuni subsp. doylei 269.97  Bacteria  normal  0.591446  n/a   
 
 
-
 
NC_011898  Ccel_1982  two component transcriptional regulator, AraC family  35.94 
 
 
544 aa  81.3  0.00000000000002  Clostridium cellulolyticum H10  Bacteria  normal  0.184696  n/a   
 
 
-
 
NC_013512  Sdel_1920  response regulator receiver  36.13 
 
 
226 aa  79.3  0.00000000000007  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU0280  Fis family transcriptional regulator  31.53 
 
 
450 aa  77  0.0000000000004  Geobacter sulfurreducens PCA  Bacteria  normal  0.928901  n/a   
 
 
-
 
NC_007575  Suden_1991  two component transcriptional regulator  33.64 
 
 
229 aa  75.5  0.000000000001  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  0.656084  n/a   
 
 
-
 
NC_008261  CPF_2344  AraC family DNA-binding response regulator  33.97 
 
 
507 aa  75.5  0.000000000001  Clostridium perfringens ATCC 13124  Bacteria  normal  0.627636  n/a   
 
 
-
 
NC_013512  Sdel_0705  response regulator receiver  26.91 
 
 
231 aa  75.1  0.000000000001  Sulfurospirillum deleyianum DSM 6946  Bacteria  hitchhiker  0.00025775  n/a   
 
 
-
 
NC_008576  Mmc1_1399  response regulator receiver modulated diguanylate cyclase  30.65 
 
 
476 aa  75.5  0.000000000001  Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_008576  Mmc1_2943  response regulator receiver modulated diguanylate cyclase  35.65 
 
 
438 aa  75.5  0.000000000001  Magnetococcus sp. MC-1  Bacteria  normal  0.641955  normal 
 
 
-
 
NC_008609  Ppro_0115  response regulator receiver modulated diguanylate cyclase  30.3 
 
 
304 aa  75.5  0.000000000001  Pelobacter propionicus DSM 2379  Bacteria  normal  0.113218  n/a   
 
 
-
 
NC_011891  A2cp1_0533  two component, sigma54 specific, transcriptional regulator, Fis family  30.33 
 
 
443 aa  74.7  0.000000000002  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.141325  n/a   
 
 
-
 
NC_007517  Gmet_1219  response regulator receiver sensor signal transduction histidine kinase  27.59 
 
 
396 aa  75.1  0.000000000002  Geobacter metallireducens GS-15  Bacteria  normal  hitchhiker  0.0000364001 
 
 
-
 
NC_011145  AnaeK_0537  two component, sigma54 specific, transcriptional regulator, Fis family  30.33 
 
 
446 aa  74.7  0.000000000002  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_013512  Sdel_0736  response regulator receiver  31.78 
 
 
236 aa  75.1  0.000000000002  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  n/a   
 
 
-
 
NC_009715  CCV52592_1547  cytochrome c biogenesis protein  34.19 
 
 
220 aa  74.3  0.000000000003  Campylobacter curvus 525.92  Bacteria  normal  0.0873939  n/a   
 
 
-
 
NC_007760  Adeh_0504  two component, sigma54 specific, Fis family transcriptional regulator  29.51 
 
 
443 aa  73.6  0.000000000004  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_011729  PCC7424_0435  PAS/PAC sensor hybrid histidine kinase  35 
 
 
703 aa  73.6  0.000000000004  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_010184  BcerKBAB4_3138  two component transcriptional regulator  37.07 
 
 
224 aa  73.2  0.000000000005  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_011899  Hore_19910  response regulator receiver protein  27.57 
 
 
386 aa  73.2  0.000000000005  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_008262  CPR_2056  AraC family DNA-binding response regulator  33.33 
 
 
507 aa  73.2  0.000000000005  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_009802  CCC13826_1869  NAD(P)H-flavin oxidoreductase  30.77 
 
 
229 aa  72.8  0.000000000007  Campylobacter concisus 13826  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_0776  two component, sigma54 specific, Fis family transcriptional regulator  34.55 
 
 
454 aa  72.4  0.000000000009  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_010001  Cphy_3282  two component AraC family transcriptional regulator  35.59 
 
 
535 aa  72.4  0.00000000001  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_013512  Sdel_0448  response regulator receiver  29.06 
 
 
224 aa  72.4  0.00000000001  Sulfurospirillum deleyianum DSM 6946  Bacteria  unclonable  0.00000000838603  n/a   
 
 
-
 
NC_002939  GSU0811  nitrogen regulation protein NtrX  33.64 
 
 
456 aa  72.4  0.00000000001  Geobacter sulfurreducens PCA  Bacteria  normal  0.686874  n/a   
 
 
-
 
NC_007575  Suden_1242  two component transcriptional regulator  40.54 
 
 
227 aa  71.6  0.00000000002  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  0.546498  n/a   
 
 
-
 
NC_011146  Gbem_3286  two component, sigma54 specific, transcriptional regulator, Fis family  29.14 
 
 
458 aa  71.2  0.00000000002  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_0962  two component, sigma54 specific, transcriptional regulator, Fis family  29.14 
 
 
458 aa  71.6  0.00000000002  Geobacter sp. M21  Bacteria  n/a    normal  0.277353 
 
 
-
 
NC_009483  Gura_3335  two component, sigma-54 specific, Fis family transcriptional regulator  32.41 
 
 
458 aa  71.2  0.00000000002  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_008751  Dvul_2371  response regulator receiver protein  25.84 
 
 
233 aa  71.2  0.00000000002  Desulfovibrio vulgaris DP4  Bacteria  normal  normal 
 
 
-
 
NC_007517  Gmet_0778  response regulator receiver domain-containing protein  35.04 
 
 
142 aa  70.9  0.00000000003  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_007575  Suden_0749  two component transcriptional regulator  33.05 
 
 
230 aa  70.5  0.00000000004  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_1899  response regulator receiver modulated diguanylate cyclase with PAS/PAC sensor  29.82 
 
 
616 aa  70.1  0.00000000004  Geobacter lovleyi SZ  Bacteria  normal  0.764058  n/a   
 
 
-
 
NC_011898  Ccel_0198  two component transcriptional regulator, AraC family  35.59 
 
 
534 aa  70.1  0.00000000004  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_008146  Mmcs_4301  two component transcriptional regulator  33.64 
 
 
230 aa  70.1  0.00000000005  Mycobacterium sp. MCS  Bacteria  normal  0.681825  n/a   
 
 
-
 
NC_008705  Mkms_4387  two component transcriptional regulator  33.64 
 
 
230 aa  70.1  0.00000000005  Mycobacterium sp. KMS  Bacteria  normal  0.0316317  normal 
 
 
-
 
NC_009077  Mjls_4681  two component transcriptional regulator  33.64 
 
 
230 aa  70.1  0.00000000005  Mycobacterium sp. JLS  Bacteria  normal  normal  0.354926 
 
 
-
 
NC_009441  Fjoh_1987  two component LuxR family transcriptional regulator  41.25 
 
 
213 aa  69.7  0.00000000006  Flavobacterium johnsoniae UW101  Bacteria  normal  0.429674  n/a   
 
 
-
 
NC_011060  Ppha_1319  two component, sigma54 specific, transcriptional regulator, Fis family  32.33 
 
 
452 aa  69.7  0.00000000006  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  n/a   
 
 
-
 
NC_013385  Adeg_2019  response regulator receiver protein  34.21 
 
 
123 aa  69.7  0.00000000006  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_008576  Mmc1_2693  histidine kinase  28.86 
 
 
782 aa  69.7  0.00000000007  Magnetococcus sp. MC-1  Bacteria  normal  0.145264  normal  0.474998 
 
 
-
 
NC_009715  CCV52592_0851  two component transcriptional regulator  25.64 
 
 
230 aa  69.3  0.00000000008  Campylobacter curvus 525.92  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_1558  response regulator receiver protein  28.18 
 
 
566 aa  69.3  0.00000000008  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_013223  Dret_0410  anti-sigma-factor antagonist  23.47 
 
 
238 aa  68.6  0.0000000001  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal  0.694521 
 
 
-
 
NC_013512  Sdel_1980  response regulator receiver  35.56 
 
 
126 aa  68.9  0.0000000001  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  n/a   
 
 
-
 
NC_011884  Cyan7425_2816  multi-sensor hybrid histidine kinase  31.62 
 
 
682 aa  68.6  0.0000000001  Cyanothece sp. PCC 7425  Bacteria  normal  normal  0.0864703 
 
 
-
 
NC_011898  Ccel_0944  two component transcriptional regulator, AraC family  29.61 
 
 
539 aa  68.9  0.0000000001  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU1658  response regulator/GGDEF domain-containing protein  32.87 
 
 
458 aa  67.8  0.0000000002  Geobacter sulfurreducens PCA  Bacteria  normal  0.939598  n/a   
 
 
-
 
NC_007413  Ava_1343  PAS/PAC sensor hybrid histidine kinase  33.33 
 
 
576 aa  68.2  0.0000000002  Anabaena variabilis ATCC 29413  Bacteria  normal  0.413012  normal  0.0352192 
 
 
-
 
NC_011898  Ccel_1138  two component transcriptional regulator, AraC family  32.73 
 
 
519 aa  68.2  0.0000000002  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_0338  response regulator receiver modulated metal dependent phosphohydrolase  30 
 
 
513 aa  67.4  0.0000000003  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.102838 
 
 
-
 
NC_013173  Dbac_2828  response regulator receiver sensor signal transduction histidine kinase  26.87 
 
 
410 aa  67.8  0.0000000003  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_013169  Ksed_03240  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  28.22 
 
 
229 aa  67.4  0.0000000003  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.604152  normal 
 
 
-
 
NC_007575  Suden_0281  multi-sensor signal transduction histidine kinase  34.58 
 
 
526 aa  67.4  0.0000000003  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  0.630164  n/a   
 
 
-
 
NC_007575  Suden_1880  two component transcriptional regulator  31.82 
 
 
223 aa  67.4  0.0000000003  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  n/a   
 
 
-
 
NC_012034  Athe_0853  two component transcriptional regulator, AraC family  29.87 
 
 
509 aa  67.4  0.0000000003  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_011899  Hore_16930  response regulator receiver protein  35.19 
 
 
117 aa  67.4  0.0000000003  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_009565  TBFG_10999  two component response transcriptional regulatory protein MprA  30.09 
 
 
230 aa  67  0.0000000004  Mycobacterium tuberculosis F11  Bacteria  hitchhiker  0.00000000188235  normal  0.671639 
 
 
-
 
NC_011831  Cagg_3265  two component transcriptional regulator, winged helix family  33.62 
 
 
245 aa  67  0.0000000004  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.45002  normal 
 
 
-
 
NC_011145  AnaeK_3251  two component, sigma54 specific, transcriptional regulator, Fis family  26.4 
 
 
465 aa  67  0.0000000004  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_007413  Ava_3043  multi-sensor hybrid histidine kinase  32.03 
 
 
1122 aa  67  0.0000000004  Anabaena variabilis ATCC 29413  Bacteria  decreased coverage  0.000641159  normal 
 
 
-
 
NC_013132  Cpin_6438  putative two component, sigma54 specific, transcriptional regulator, Fis family  30.88 
 
 
394 aa  67  0.0000000004  Chitinophaga pinensis DSM 2588  Bacteria  decreased coverage  0.00615091  normal  0.383003 
 
 
-
 
NC_013926  Aboo_1536  response regulator receiver protein  33.93 
 
 
115 aa  67  0.0000000004  Aciduliprofundum boonei T469  Archaea  normal  n/a   
 
 
-
 
NC_007517  Gmet_2186  response regulator receiver sensor signal transduction histidine kinase  29.37 
 
 
381 aa  67  0.0000000004  Geobacter metallireducens GS-15  Bacteria  hitchhiker  0.000654459  hitchhiker  0.000162526 
 
 
-
 
NC_011884  Cyan7425_0320  multi-sensor hybrid histidine kinase  31.9 
 
 
838 aa  67  0.0000000004  Cyanothece sp. PCC 7425  Bacteria  normal  normal  0.88782 
 
 
-
 
NC_010320  Teth514_0399  response regulator receiver protein  32.86 
 
 
365 aa  67  0.0000000004  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_013037  Dfer_5352  two component transcriptional regulator, winged helix family  29.29 
 
 
224 aa  66.6  0.0000000005  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal 
 
 
-
 
NC_009441  Fjoh_5047  two component, sigma54 specific, Fis family transcriptional regulator  34.85 
 
 
387 aa  66.2  0.0000000006  Flavobacterium johnsoniae UW101  Bacteria  normal  0.0897789  n/a   
 
 
-
 
NC_007498  Pcar_2345  two component signal transduction response regulator  30.56 
 
 
455 aa  66.2  0.0000000006  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  0.00459366  n/a   
 
 
-
 
NC_008527  LACR_1090  DNA-binding response regulator  31.58 
 
 
228 aa  66.6  0.0000000006  Lactococcus lactis subsp. cremoris SK11  Bacteria  decreased coverage  0.00019826  n/a   
 
 
-
 
NC_008346  Swol_1448  response regulator receiver protein  39.33 
 
 
129 aa  66.2  0.0000000007  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  0.637441  n/a   
 
 
-
 
NC_009668  Oant_3478  two component, sigma54 specific, Fis family transcriptional regulator  31.2 
 
 
450 aa  66.2  0.0000000007  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_0976  anti-sigma-factor antagonist  28.7 
 
 
237 aa  66.2  0.0000000007  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_013216  Dtox_0715  response regulator receiver protein  31.58 
 
 
121 aa  65.9  0.0000000008  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal 
 
 
-
 
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