| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_3043 |
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| Symbol | |
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| ID | 3681161 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | + |
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| Start bp | 3767386 |
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| End bp | 3770754 |
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| Gene Length | 3369 bp |
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| Protein Length | 1122 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637718389 |
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| Product | multi-sensor hybrid histidine kinase |
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| Protein accession | YP_323548 |
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| Protein GI | 75909252 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000641159 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGATTG ACGAATTAAC TATGCCATTC AACGAGCTAC CGATTGACTT ACATAATTTA
TATCATTTGA TCGATCGTCA TCCTTTAACG ATCGCTCCTG ATAGTTATGT TATTGATGCT
ATTAGATTGA TGAATCAACA AGGTAATAGT CCACCATTCA TCAGCTTAAA CTCATCGGGA
ACTTATAGCA ATAAGAATTC AAAACAAACT AGCTATGTTT TAGTAGTTGA GGCAGGAAAT
ATCTTAGGAA TCTTTACAGA GCGGGATTTA GTCAGGTTGG CTGCATCAAA ATTTGATTTA
TCAGATTTAA AAATATCTGA GGTGATGACA CAACCAGTGA TCACGATGAA AATGTCAAAC
TCCCCAGATA TTTTTACAGC TTTGTCCTTA TTAAATCACC ATCAGATTCG CCATTTGCCA
GTTTTGAACA GTAGAGAGCA ATTAATAGGG GTTGTGAGTG CAACTAGCTT ATTGCAAGGA
TTGCATCAAT TAGAAAGCTT TTACTGTCTG CAATCCTTAC AACAAGCACA ACAGATAGAA
TTTTTACGCT ACCCGTCTCG TAACCCTCTC AACGAAGTGG AACATCACGA CGAATTTCTG
GGATTGAGGA AGGTTTGCCA ACGAGGCATT GTTGAGGTTC AACGGGCAGA ACAAGCTTTA
CAGCAAAGTG AGGAACTGTA TCGCCAGTTA GTTGAGCTGC AAAATGAGGT AATTTTGCGT
GTTGATAATT TAGGGAGACT GACATTTGTT AATTCAGTAG CTTGCAAAAT TTTTGGCAAG
CCAATGGATG AGTTAATTGG TCAGCTAATA TTTGAGTGGA TGTTCCCTGA AGATGAAATC
CCTCAAGCAA AAGAATATTT CCAAGCCCTC AAATCACCAC CTTATCAAAT CAGTATTAGC
GAGCAGCCTG TATTAACACC TAGTGGTATA CGTTGGTTTC AGTGGAATAT TATCGGCATT
GAAAATACCA TTGGGGAGGT TGTTGAGTTT CAAGGAGTAG GCAGAGATAT TACCGAACGC
AGACAGGCAG AAGAATCGCT ACGACAGAGT GAGGCAAGAT TAAATTTAGC CTTGGAAGCC
GCCAACATGG GTATCTGGGA TTGGTATCTT TTGACCAATG AAACCATCTG GTCTGCCAAT
ATGGGATTAC TGTATGGTCT GCCAAGTACA ACTTTATGTC CCAGTCCTGA AGACTTCCTG
CAATTAGTCC ATCCTGAAGA CCGAGAGAAG TTCTCTCAGT CTGCCAAGAA CAGCATTGAG
CAAGGAATAC CATTTACTAT CGAATATCGG ACTGTCTGGA ATGATGGCAG CATTCATTGG
CTCAATAGTA AGGGTCAAGT CTACTATGAC AAAGCGGGTA AACCAATCAG GATGATTGGC
ACTACTAGAG ATATTAGCGA ACGCAAACAA GCAGAGGCAT CCCTACGGGA AAGTGAGGAA
CTTTATCGCT CAGTGGTGAC AGCTATGAGT GAGGGTATTG TTTTGCTACA TACTGATGGC
CAAATTATTG CTTGTAATGC AAGTGCCGAG AGAATTTTAG GGTTAAGCCG AGAGCAAATA
TTAGAACGTA CCTGTGTTGA TGAGCGTTGG CTGACTATTC ATGAAGATGG CTCTCCGTTT
CCTCGTGAAC AGCATCCAGC AATGGAGACG CTACGCACAG GCAAACCCTG CTCTAATGTG
GTCATGGGAG TTCACAAGCC AGACGGACAA ATAAGCTGGA TTTCGATTAA TTCTCAACCT
TTGTGTCGGG AAAATGAAAC GGTTCCTTAT GCAGTAGTTA CATCCTTTGC CGATATTAGT
GAACAGCAAG CTGCACTACG CTCACGCCAA CAAGCAGAGC AGAAGATTCG TGAGCAAGCA
GCTTTACTAG AAATAGCCAC TGATGCCATT TTTGTTCGAG ACTTACAAAG CAATATCTTA
TTTTGGAATC AAGGTGCAGA ACGCTTGTAT GGTTGGTCAC AACAGGAAGC TATCGGCCGT
AATACCCAAG AATTACTATA TTCTGAAACT TCATTTCACC TGCATGAAGC AGCTCTCAAT
GTTGTTATGG AGTTGGGATT GTGGCAGGGT GAGTTGCAAA AACTGACTAA ATCTGGCAAG
GAAGTTATTG TGGAAAGCCG TTGGACACTA ATGCGTGATG CAGCTGGGCA ACCCAAATCA
ATTTTAGTTG TTGATACCGA TATCACCCAA AAAAAACAAC TAGAAGAACA GTTCTTCCGC
GCTCAAAGAT TAGAGAGTCT GGGTACCCTT GCAGGTGGTA TTGCTCACGA CTTGAATAAT
ATCTTGACCC CCATTTTGGC AGCGTCCCAA CTCCTGAAAG TCAAATTTCC CGACGAGCAA
GGACGAACAC CTATGGTAGG CAGTACATCT TTTCAACACC TGTTAGAGAT TGTGGAAAGC
AACGCCAGAA GGGGAGCAGG TTTAGTCAAG CAGGTGTTAT CCTTTGCACG CGGTTTTAAA
GGAGAACGGA CAATAGTCCA ACTCAAACAC TTAATTACCG ATATTATTCT GATTGGTAAA
CAGACGTTTC CCAAGTCAAT TGAATTTATC AGTAGCTTTC CCGAAGCACT GTGGTCAGTC
TGTGGGGATG TCACTCAATT ACACCAAGTG TTGATGAATC TTGTCGTCAA TGCTCGTGAT
GCCATGCCCA ATGGTGGGAA GATCAATGTT ACAGCAGAAA ACATTTTTAT TGATGAAACC
TATGCCAGCA TGATTTTAGA GGCGCAAGTT GGCAACTACA TTCAGCTGAC AGTCACTGAC
ACTGGTATAG GAATGCCTCC AGAAATCTTA AATAGAATTT TTGAGCCATT TTTTACGACA
AAAGAGGTGG GAGCAGGTAC GGGTTTGGGA CTGTCAACTG TGTTGGGAAT TATCAAAAGT
CATGGAGGTT TTGTCAAGGT CTCCAGCAAA GTTGGTCAAG GTAGCCAATT TAAGCTGTTC
TTGCCAGCAA TTCCAGCAAC GCCAGATTTA ACGATAGAAG AAATAGAAAC ACCATCGGGT
AGCGGTGAAT TAATTTTAGT TGTCGATGAT GAAGCACCAA TTTGCGAAAT TGCCAAGGTG
ATTCTCGAAA AGTTTAACTA TAAAATTCTT ACCGCCTGTA ATGGTATTGA GGCGATCGCA
CTTTATGCCC AACACAAACA TCGTATTAGC GCTGTTCTCA TGGATATGAT GATGCCAGAA
ATGGACGGTA TCACAGCCAT TCGCACTTTG AAAAAAATGA ACTCAAAGGT ACAAGTTATT
GCTAGTAGTG GGATCAATTC TACAGAAACA GTGGCGCAAG CAGCCATGAT AGGTGTGCAG
CAAGTTTTAC CCAAACCTTT TACAGCCAAG GAATTATTAA ATAGCTTACA TCACGTACTT
AGATGTTGA
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| Protein sequence | MKIDELTMPF NELPIDLHNL YHLIDRHPLT IAPDSYVIDA IRLMNQQGNS PPFISLNSSG
TYSNKNSKQT SYVLVVEAGN ILGIFTERDL VRLAASKFDL SDLKISEVMT QPVITMKMSN
SPDIFTALSL LNHHQIRHLP VLNSREQLIG VVSATSLLQG LHQLESFYCL QSLQQAQQIE
FLRYPSRNPL NEVEHHDEFL GLRKVCQRGI VEVQRAEQAL QQSEELYRQL VELQNEVILR
VDNLGRLTFV NSVACKIFGK PMDELIGQLI FEWMFPEDEI PQAKEYFQAL KSPPYQISIS
EQPVLTPSGI RWFQWNIIGI ENTIGEVVEF QGVGRDITER RQAEESLRQS EARLNLALEA
ANMGIWDWYL LTNETIWSAN MGLLYGLPST TLCPSPEDFL QLVHPEDREK FSQSAKNSIE
QGIPFTIEYR TVWNDGSIHW LNSKGQVYYD KAGKPIRMIG TTRDISERKQ AEASLRESEE
LYRSVVTAMS EGIVLLHTDG QIIACNASAE RILGLSREQI LERTCVDERW LTIHEDGSPF
PREQHPAMET LRTGKPCSNV VMGVHKPDGQ ISWISINSQP LCRENETVPY AVVTSFADIS
EQQAALRSRQ QAEQKIREQA ALLEIATDAI FVRDLQSNIL FWNQGAERLY GWSQQEAIGR
NTQELLYSET SFHLHEAALN VVMELGLWQG ELQKLTKSGK EVIVESRWTL MRDAAGQPKS
ILVVDTDITQ KKQLEEQFFR AQRLESLGTL AGGIAHDLNN ILTPILAASQ LLKVKFPDEQ
GRTPMVGSTS FQHLLEIVES NARRGAGLVK QVLSFARGFK GERTIVQLKH LITDIILIGK
QTFPKSIEFI SSFPEALWSV CGDVTQLHQV LMNLVVNARD AMPNGGKINV TAENIFIDET
YASMILEAQV GNYIQLTVTD TGIGMPPEIL NRIFEPFFTT KEVGAGTGLG LSTVLGIIKS
HGGFVKVSSK VGQGSQFKLF LPAIPATPDL TIEEIETPSG SGELILVVDD EAPICEIAKV
ILEKFNYKIL TACNGIEAIA LYAQHKHRIS AVLMDMMMPE MDGITAIRTL KKMNSKVQVI
ASSGINSTET VAQAAMIGVQ QVLPKPFTAK ELLNSLHHVL RC
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