More than 300 homologs were found in PanDaTox collection
for query gene Sde_0520 on replicon NC_007912
Organism: Saccharophagus degradans 2-40



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007912  Sde_0520  putative methyl-accepting chemotaxis sensory transducer  100 
 
 
711 aa  1432    Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_5305  chemotaxis sensory transducer  36.02 
 
 
686 aa  195  3e-48  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.115158  normal  0.281343 
 
 
-
 
NC_007912  Sde_3631  putative methyl-accepting chemotaxis sensory transducer  36.28 
 
 
731 aa  191  2.9999999999999997e-47  Saccharophagus degradans 2-40  Bacteria  normal  0.455048  normal 
 
 
-
 
NC_009439  Pmen_0406  methyl-accepting chemotaxis sensory transducer  34.48 
 
 
678 aa  189  2e-46  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_0511  twitching motility protein PilJ  35.03 
 
 
682 aa  187  7e-46  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_05360  twitching motility protein PilJ  35.03 
 
 
682 aa  187  7e-46  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_0904  methyl-accepting chemotaxis sensory transducer  35.28 
 
 
745 aa  186  9e-46  Acidovorax citrulli AAC00-1  Bacteria  normal  normal  0.405383 
 
 
-
 
NC_007908  Rfer_1374  methyl-accepting chemotaxis sensory transducer  33.98 
 
 
759 aa  186  1.0000000000000001e-45  Rhodoferax ferrireducens T118  Bacteria  normal  0.43954  n/a   
 
 
-
 
NC_007969  Pcryo_2098  methyl-accepting chemotaxis sensory transducer  35.28 
 
 
473 aa  186  1.0000000000000001e-45  Psychrobacter cryohalolentis K5  Bacteria  normal  normal 
 
 
-
 
NC_008786  Veis_3018  methyl-accepting chemotaxis sensory transducer  34.87 
 
 
767 aa  186  2.0000000000000003e-45  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.238689  normal  0.701163 
 
 
-
 
NC_007484  Noc_0128  chemotaxis sensory transducer  37.32 
 
 
537 aa  184  3e-45  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_3575  methyl-accepting chemotaxis sensory transducer  32.88 
 
 
754 aa  184  4.0000000000000006e-45  Acidovorax sp. JS42  Bacteria  normal  0.946853  normal  0.162427 
 
 
-
 
NC_011992  Dtpsy_2898  methyl-accepting chemotaxis sensory transducer  32.88 
 
 
754 aa  184  6e-45  Acidovorax ebreus TPSY  Bacteria  normal  0.0204496  n/a   
 
 
-
 
NC_008740  Maqu_3770  methyl-accepting chemotaxis sensory transducer  34.17 
 
 
691 aa  184  6e-45  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_007947  Mfla_1245  methyl-accepting chemotaxis sensory transducer  36.76 
 
 
543 aa  183  8.000000000000001e-45  Methylobacillus flagellatus KT  Bacteria  normal  0.403133  normal  0.310409 
 
 
-
 
NC_011901  Tgr7_2901  putative methyl-accepting chemotaxis sensory transducer  34.99 
 
 
700 aa  183  9.000000000000001e-45  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.726182  n/a   
 
 
-
 
NC_008781  Pnap_3351  methyl-accepting chemotaxis sensory transducer  34.32 
 
 
759 aa  182  2e-44  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.335724  normal 
 
 
-
 
NC_008340  Mlg_0358  methyl-accepting chemotaxis sensory transducer  38.29 
 
 
560 aa  181  2.9999999999999997e-44  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.0237962  normal  0.734928 
 
 
-
 
NC_007204  Psyc_1815  putative chemotaxis sensory transducer  37.42 
 
 
475 aa  180  7e-44  Psychrobacter arcticus 273-4  Bacteria  normal  normal 
 
 
-
 
NC_010717  PXO_01605  pilus biogenesis protein  36.52 
 
 
678 aa  180  8e-44  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.128934  n/a   
 
 
-
 
NC_010002  Daci_1575  methyl-accepting chemotaxis sensory transducer  33.97 
 
 
749 aa  179  1e-43  Delftia acidovorans SPH-1  Bacteria  normal  normal  0.114033 
 
 
-
 
NC_007948  Bpro_1139  methyl-accepting chemotaxis sensory transducer  34.02 
 
 
692 aa  180  1e-43  Polaromonas sp. JS666  Bacteria  normal  normal  0.534971 
 
 
-
 
NC_007404  Tbd_2549  chemotaxis sensory transducer  34.05 
 
 
707 aa  179  2e-43  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  normal 
 
 
-
 
NC_010524  Lcho_3968  methyl-accepting chemotaxis sensory transducer  33.52 
 
 
777 aa  179  2e-43  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.0103685 
 
 
-
 
NC_013889  TK90_2397  methyl-accepting chemotaxis sensory transducer  33.43 
 
 
686 aa  179  2e-43  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.688228 
 
 
-
 
NC_012791  Vapar_4623  methyl-accepting chemotaxis sensory transducer  34.12 
 
 
770 aa  177  4e-43  Variovorax paradoxus S110  Bacteria  normal  0.408638  n/a   
 
 
-
 
NC_008825  Mpe_A3187  methyl-accepting chemotaxis sensory transducer  34.12 
 
 
745 aa  177  8e-43  Methylibium petroleiphilum PM1  Bacteria  normal  0.484204  normal  0.234759 
 
 
-
 
NC_009524  PsycPRwf_2156  methyl-accepting chemotaxis sensory transducer  34.43 
 
 
575 aa  177  8e-43  Psychrobacter sp. PRwf-1  Bacteria  normal  normal 
 
 
-
 
NC_011884  Cyan7425_3745  methyl-accepting chemotaxis sensory transducer  33.75 
 
 
852 aa  177  9e-43  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_0475  methyl-accepting chemotaxis sensory transducer  33.72 
 
 
686 aa  175  1.9999999999999998e-42  Pseudomonas putida W619  Bacteria  normal  0.178091  normal 
 
 
-
 
NC_007973  Rmet_0672  methyl-accepting chemotaxis sensory transducer  36.77 
 
 
733 aa  176  1.9999999999999998e-42  Cupriavidus metallidurans CH34  Bacteria  normal  0.371682  normal  0.522662 
 
 
-
 
NC_009512  Pput_4863  methyl-accepting chemotaxis sensory transducer  34.01 
 
 
686 aa  175  2.9999999999999996e-42  Pseudomonas putida F1  Bacteria  normal  decreased coverage  0.0070905 
 
 
-
 
NC_002947  PP_4989  methyl-accepting chemotaxis sensory transducer  34.01 
 
 
686 aa  175  2.9999999999999996e-42  Pseudomonas putida KT2440  Bacteria  normal  0.289293  normal 
 
 
-
 
NC_010322  PputGB1_5039  methyl-accepting chemotaxis sensory transducer  34.01 
 
 
686 aa  175  2.9999999999999996e-42  Pseudomonas putida GB-1  Bacteria  normal  0.468878  normal 
 
 
-
 
NC_010682  Rpic_0615  methyl-accepting chemotaxis sensory transducer  33.24 
 
 
745 aa  174  3.9999999999999995e-42  Ralstonia pickettii 12J  Bacteria  normal  0.685399  normal 
 
 
-
 
NC_012856  Rpic12D_0563  methyl-accepting chemotaxis sensory transducer  33.24 
 
 
745 aa  174  3.9999999999999995e-42  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_004578  PSPTO_5031  type IV pilus biogenesis protein PilJ  35.09 
 
 
680 aa  174  5.999999999999999e-42  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007347  Reut_A2620  methyl-accepting chemotaxis sensory transducer  36.81 
 
 
733 aa  173  1e-41  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_0491  chemotaxis sensory transducer  34.11 
 
 
680 aa  172  2e-41  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_007604  Synpcc7942_1015  methyl-accepting chemotaxis sensory transducer  31.94 
 
 
839 aa  171  5e-41  Synechococcus elongatus PCC 7942  Bacteria  normal  0.0741142  normal 
 
 
-
 
NC_007298  Daro_3896  chemotaxis sensory transducer  35.5 
 
 
706 aa  171  6e-41  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_003295  RSc0671  putative twitching motility transmembrane protein  34.52 
 
 
743 aa  170  8e-41  Ralstonia solanacearum GMI1000  Bacteria  normal  0.357708  normal 
 
 
-
 
NC_011662  Tmz1t_3691  methyl-accepting chemotaxis sensory transducer  37.88 
 
 
704 aa  169  1e-40  Thauera sp. MZ1T  Bacteria  normal  0.02239  n/a   
 
 
-
 
NC_011071  Smal_3086  methyl-accepting chemotaxis sensory transducer  37.07 
 
 
678 aa  169  2e-40  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal  0.12197 
 
 
-
 
NC_014248  Aazo_4950  methyl-accepting chemotaxis sensory transducer  34.32 
 
 
975 aa  169  2e-40  'Nostoc azollae' 0708  Bacteria  normal  n/a   
 
 
-
 
NC_010513  Xfasm12_1019  putative methyl-accepting chemotaxis sensory transducer  34.71 
 
 
680 aa  168  2.9999999999999998e-40  Xylella fastidiosa M12  Bacteria  normal  0.58121  n/a   
 
 
-
 
NC_007413  Ava_0506  chemotaxis sensory transducer  34.57 
 
 
982 aa  168  2.9999999999999998e-40  Anabaena variabilis ATCC 29413  Bacteria  normal  0.202983  normal 
 
 
-
 
NC_011729  PCC7424_2782  methyl-accepting chemotaxis sensory transducer with GAF sensor  33.24 
 
 
902 aa  168  4e-40  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_010577  XfasM23_0895  methyl-accepting chemotaxis sensory transducer  34.44 
 
 
680 aa  167  5e-40  Xylella fastidiosa M23  Bacteria  normal  n/a   
 
 
-
 
NC_013422  Hneap_0517  methyl-accepting chemotaxis sensory transducer  35 
 
 
671 aa  166  1.0000000000000001e-39  Halothiobacillus neapolitanus c2  Bacteria  normal  0.104858  n/a   
 
 
-
 
NC_011729  PCC7424_3002  methyl-accepting chemotaxis sensory transducer  31.23 
 
 
915 aa  165  3e-39  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_011726  PCC8801_3339  methyl-accepting chemotaxis sensory transducer with GAF sensor  34.59 
 
 
1153 aa  162  2e-38  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013161  Cyan8802_2778  methyl-accepting chemotaxis sensory transducer with GAF sensor  34.59 
 
 
1153 aa  162  2e-38  Cyanothece sp. PCC 8802  Bacteria  normal  normal  0.970502 
 
 
-
 
NC_011726  PCC8801_4287  methyl-accepting chemotaxis sensory transducer  29.7 
 
 
854 aa  161  4e-38  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013161  Cyan8802_4347  methyl-accepting chemotaxis sensory transducer  29.7 
 
 
854 aa  161  4e-38  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_013161  Cyan8802_0749  methyl-accepting chemotaxis sensory transducer  30.92 
 
 
880 aa  159  2e-37  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_011726  PCC8801_0720  methyl-accepting chemotaxis sensory transducer  30.92 
 
 
880 aa  159  2e-37  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_011884  Cyan7425_4746  methyl-accepting chemotaxis sensory transducer  30.39 
 
 
503 aa  155  2.9999999999999998e-36  Cyanothece sp. PCC 7425  Bacteria  normal  hitchhiker  0.000363987 
 
 
-
 
NC_011884  Cyan7425_1425  methyl-accepting chemotaxis sensory transducer  30.63 
 
 
787 aa  150  1.0000000000000001e-34  Cyanothece sp. PCC 7425  Bacteria  normal  0.68627  normal  0.569737 
 
 
-
 
NC_011884  Cyan7425_1426  methyl-accepting chemotaxis sensory transducer  30.24 
 
 
768 aa  149  2.0000000000000003e-34  Cyanothece sp. PCC 7425  Bacteria  normal  0.541717  normal  0.185322 
 
 
-
 
NC_011729  PCC7424_4603  methyl-accepting chemotaxis sensory transducer  29.11 
 
 
820 aa  147  9e-34  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.452141 
 
 
-
 
NC_011726  PCC8801_3341  methyl-accepting chemotaxis sensory transducer with GAF sensor  33.65 
 
 
1142 aa  145  2e-33  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013161  Cyan8802_2776  methyl-accepting chemotaxis sensory transducer with GAF sensor  33.65 
 
 
1142 aa  144  5e-33  Cyanothece sp. PCC 8802  Bacteria  normal  normal  0.380177 
 
 
-
 
NC_011729  PCC7424_2793  methyl-accepting chemotaxis sensory transducer  28.68 
 
 
778 aa  141  3.9999999999999997e-32  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_008312  Tery_3246  methyl-accepting chemotaxis sensory transducer  33.16 
 
 
1105 aa  140  6e-32  Trichodesmium erythraeum IMS101  Bacteria  normal  0.610597  normal  0.482443 
 
 
-
 
NC_007604  Synpcc7942_0858  methyl-accepting chemotaxis sensory transducer with phytochrome sensor  35.11 
 
 
1406 aa  140  1e-31  Synechococcus elongatus PCC 7942  Bacteria  normal  0.0185965  normal  0.079214 
 
 
-
 
NC_011884  Cyan7425_1064  methyl-accepting chemotaxis sensory transducer with GAF sensor  34.62 
 
 
879 aa  138  4e-31  Cyanothece sp. PCC 7425  Bacteria  normal  0.698769  hitchhiker  0.00000570114 
 
 
-
 
NC_013946  Mrub_0908  methyl-accepting chemotaxis sensory transducer  27.43 
 
 
772 aa  135  1.9999999999999998e-30  Meiothermus ruber DSM 1279  Bacteria  normal  normal 
 
 
-
 
NC_007413  Ava_0061  chemotaxis sensory transducer  29.33 
 
 
752 aa  134  6e-30  Anabaena variabilis ATCC 29413  Bacteria  normal  0.691552  normal  0.30416 
 
 
-
 
NC_013501  Rmar_1624  methyl-accepting chemotaxis sensory transducer  26.49 
 
 
626 aa  132  2.0000000000000002e-29  Rhodothermus marinus DSM 4252  Bacteria  normal  0.835429  n/a   
 
 
-
 
NC_009674  Bcer98_0489  methyl-accepting chemotaxis sensory transducer  27.1 
 
 
660 aa  130  8.000000000000001e-29  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_013502  Rmar_2870  methyl-accepting chemotaxis sensory transducer  27.96 
 
 
636 aa  130  9.000000000000001e-29  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_5515  chemotaxis sensory transducer  34.52 
 
 
658 aa  129  2.0000000000000002e-28  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.501051  normal  0.584272 
 
 
-
 
NC_013946  Mrub_0909  methyl-accepting chemotaxis sensory transducer  28.91 
 
 
754 aa  127  6e-28  Meiothermus ruber DSM 1279  Bacteria  normal  normal 
 
 
-
 
NC_010814  Glov_1286  methyl-accepting chemotaxis sensory transducer  34.75 
 
 
538 aa  127  7e-28  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_007413  Ava_3778  chemotaxis sensory transducer, phytochrome sensor  34.56 
 
 
1100 aa  127  8.000000000000001e-28  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.275371 
 
 
-
 
NC_011725  BCB4264_A0594  methyl-accepting chemotaxis protein  26.78 
 
 
658 aa  126  1e-27  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B4745  methyl-accepting chemotaxis protein  26.3 
 
 
658 aa  125  2e-27  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_0210  methyl-accepting chemotaxis sensory transducer  33.56 
 
 
632 aa  125  3e-27  Pseudomonas putida W619  Bacteria  normal  0.248487  normal  0.150257 
 
 
-
 
NC_008609  Ppro_3107  methyl-accepting chemotaxis sensory transducer  31.11 
 
 
542 aa  123  9.999999999999999e-27  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_011726  PCC8801_4017  methyl-accepting chemotaxis sensory transducer with GAF sensor  31.55 
 
 
1781 aa  123  9.999999999999999e-27  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013161  Cyan8802_4055  methyl-accepting chemotaxis sensory transducer with GAF sensor  31.55 
 
 
1781 aa  123  9.999999999999999e-27  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_008789  Hhal_1714  methyl-accepting chemotaxis sensory transducer  27.67 
 
 
673 aa  122  3e-26  Halorhodospira halophila SL1  Bacteria  normal  0.712235  n/a   
 
 
-
 
NC_005945  BAS3056  methyl-accepting chemotaxis protein  25.67 
 
 
650 aa  121  4.9999999999999996e-26  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK2273  methyl-accepting chemotaxis protein  26.88 
 
 
650 aa  121  4.9999999999999996e-26  Bacillus cereus E33L  Bacteria  normal  0.487735  n/a   
 
 
-
 
NC_008609  Ppro_1391  methyl-accepting chemotaxis sensory transducer  31.87 
 
 
557 aa  121  4.9999999999999996e-26  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_3291  methyl-accepting chemotaxis protein  25.67 
 
 
650 aa  121  4.9999999999999996e-26  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.279097  n/a   
 
 
-
 
NC_011773  BCAH820_3282  methyl-accepting chemotaxis protein  26.15 
 
 
660 aa  121  6e-26  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_011146  Gbem_0728  methyl-accepting chemotaxis sensory transducer  35.22 
 
 
537 aa  120  7e-26  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_0071  histidine kinase, HAMP region: chemotaxis sensory transducer  34.19 
 
 
658 aa  120  7.999999999999999e-26  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_2310  methyl-accepting chemotaxis sensory transducer  31.36 
 
 
492 aa  119  9.999999999999999e-26  Pseudomonas putida KT2440  Bacteria  normal  0.178377  decreased coverage  0.00000773933 
 
 
-
 
NC_003909  BCE_0619  methyl-accepting chemotaxis protein  25.74 
 
 
658 aa  120  9.999999999999999e-26  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_014212  Mesil_1845  methyl-accepting chemotaxis sensory transducer  29.62 
 
 
660 aa  120  9.999999999999999e-26  Meiothermus silvanus DSM 9946  Bacteria  normal  0.655459  normal  0.855545 
 
 
-
 
NC_009512  Pput_3459  methyl-accepting chemotaxis sensory transducer  31.36 
 
 
492 aa  119  1.9999999999999998e-25  Pseudomonas putida F1  Bacteria  normal  hitchhiker  0.000433284 
 
 
-
 
NC_010814  Glov_2776  methyl-accepting chemotaxis sensory transducer  30.15 
 
 
544 aa  119  1.9999999999999998e-25  Geobacter lovleyi SZ  Bacteria  normal  0.839191  n/a   
 
 
-
 
NC_004578  PSPTO_0117  methyl-accepting chemotaxis protein  34.05 
 
 
658 aa  118  3e-25  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_0471  methyl-accepting chemotaxis sensory transducer with Cache sensor  26.07 
 
 
658 aa  118  3e-25  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_007103  pE33L466_0016  methyl-accepting chemotaxis protein  25.91 
 
 
660 aa  119  3e-25  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_0798  methyl-accepting chemotaxis sensory transducer  29.32 
 
 
541 aa  118  3.9999999999999997e-25  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A3533  methyl-accepting chemotaxis protein  25.42 
 
 
660 aa  117  6e-25  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
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