More than 300 homologs were found in PanDaTox collection
for query gene Rleg_5387 on replicon NC_012848
Organism: Rhizobium leguminosarum bv. trifolii WSM1325



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_012848  Rleg_5387  binding-protein-dependent transport systems inner membrane component  100 
 
 
285 aa  556  1e-157  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.76333 
 
 
-
 
NC_014212  Mesil_0670  binding-protein-dependent transport systems inner membrane component  62.85 
 
 
266 aa  303  2.0000000000000002e-81  Meiothermus silvanus DSM 9946  Bacteria  normal  normal  0.295376 
 
 
-
 
NC_013947  Snas_0171  binding-protein-dependent transport systems inner membrane component  43.75 
 
 
287 aa  243  1.9999999999999999e-63  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_010483  TRQ2_1585  binding-protein-dependent transport systems inner membrane component  45.2 
 
 
265 aa  224  1e-57  Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
NC_009486  Tpet_1536  binding-protein-dependent transport systems inner membrane component  44.8 
 
 
265 aa  223  2e-57  Thermotoga petrophila RKU-1  Bacteria  hitchhiker  0.00509999  n/a   
 
 
-
 
NC_008698  Tpen_1548  binding-protein-dependent transport systems inner membrane component  46.24 
 
 
270 aa  213  3.9999999999999995e-54  Thermofilum pendens Hrk 5  Archaea  normal  n/a   
 
 
-
 
NC_009616  Tmel_1715  binding-protein-dependent transport systems inner membrane component  42 
 
 
426 aa  160  2e-38  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_009616  Tmel_1703  binding-protein-dependent transport systems inner membrane component  42.11 
 
 
426 aa  159  6e-38  Thermosipho melanesiensis BI429  Bacteria  normal  0.954451  n/a   
 
 
-
 
NC_013923  Nmag_3871  binding-protein-dependent transport systems inner membrane component  34.92 
 
 
284 aa  140  3e-32  Natrialba magadii ATCC 43099  Archaea  normal  0.0519592  n/a   
 
 
-
 
NC_008043  TM1040_3397  binding-protein-dependent transport systems inner membrane component  40 
 
 
287 aa  139  4.999999999999999e-32  Ruegeria sp. TM1040  Bacteria  normal  0.141396  normal  0.659935 
 
 
-
 
NC_004310  BR0237  sugar ABC transporter, permease protein  34.94 
 
 
291 aa  136  4e-31  Brucella suis 1330  Bacteria  normal  0.963709  n/a   
 
 
-
 
NC_009505  BOV_0230  sugar ABC transporter, permease protein  34.94 
 
 
291 aa  136  4e-31  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_009667  Oant_0311  binding-protein-dependent transport systems inner membrane component  36.68 
 
 
292 aa  133  3e-30  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.466995  n/a   
 
 
-
 
NC_012848  Rleg_4709  binding-protein-dependent transport systems inner membrane component  39.29 
 
 
278 aa  129  5.0000000000000004e-29  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_007802  Jann_3555  binding-protein-dependent transport systems inner membrane component  33.9 
 
 
279 aa  129  6e-29  Jannaschia sp. CCS1  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_3334  binding-protein-dependent transport systems inner membrane component  33.45 
 
 
299 aa  127  2.0000000000000002e-28  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_009620  Smed_4977  binding-protein-dependent transport systems inner membrane component  33.82 
 
 
288 aa  126  5e-28  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.0547171 
 
 
-
 
NC_008243  Meso_4515  binding-protein-dependent transport systems inner membrane component  34.73 
 
 
275 aa  126  5e-28  Chelativorans sp. BNC1  Bacteria  normal  0.275064  n/a   
 
 
-
 
NC_009667  Oant_0352  binding-protein-dependent transport systems inner membrane component  34.21 
 
 
277 aa  125  7e-28  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_009636  Smed_2422  binding-protein-dependent transport systems inner membrane component  34.65 
 
 
277 aa  124  1e-27  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.161716 
 
 
-
 
NC_008698  Tpen_1617  binding-protein-dependent transport systems inner membrane component  32.05 
 
 
291 aa  124  1e-27  Thermofilum pendens Hrk 5  Archaea  normal  0.333529  n/a   
 
 
-
 
NC_011894  Mnod_5669  binding-protein-dependent transport systems inner membrane component  34.66 
 
 
275 aa  122  5e-27  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_010003  Pmob_0307  binding-protein-dependent transport systems inner membrane component  30.33 
 
 
274 aa  122  6e-27  Petrotoga mobilis SJ95  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_2678  binding-protein-dependent transport systems inner membrane component  32.07 
 
 
289 aa  122  8e-27  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_011899  Hore_00800  binding-protein-dependent transport systems inner membrane component  35.59 
 
 
280 aa  122  8e-27  Halothermothrix orenii H 168  Bacteria  normal  0.303025  n/a   
 
 
-
 
NC_009050  Rsph17029_3407  binding-protein-dependent transport systems inner membrane component  34.76 
 
 
277 aa  121  9.999999999999999e-27  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.353789  normal  0.790416 
 
 
-
 
NC_007494  RSP_3672  ABC sugar transporter, inner membrane subunit  34.76 
 
 
277 aa  121  1.9999999999999998e-26  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.191343  n/a   
 
 
-
 
NC_011899  Hore_19780  binding-protein-dependent transport systems inner membrane component  28.89 
 
 
253 aa  120  1.9999999999999998e-26  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_1682  binding-protein-dependent transport systems inner membrane component  35.4 
 
 
275 aa  121  1.9999999999999998e-26  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.299262  normal 
 
 
-
 
NC_013595  Sros_1500  binding-protein-dependent transport systems inner membrane component  35.02 
 
 
293 aa  120  1.9999999999999998e-26  Streptosporangium roseum DSM 43021  Bacteria  normal  0.347509  normal  0.943286 
 
 
-
 
NC_008786  Veis_2280  binding-protein-dependent transport systems inner membrane component  35.64 
 
 
280 aa  119  6e-26  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.326107  normal 
 
 
-
 
NC_011366  Rleg2_5850  binding-protein-dependent transport systems inner membrane component  33.77 
 
 
276 aa  119  7e-26  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.590535  normal 
 
 
-
 
NC_011830  Dhaf_2632  binding-protein-dependent transport systems inner membrane component  33.85 
 
 
281 aa  119  7.999999999999999e-26  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_008541  Arth_0050  binding-protein-dependent transport systems inner membrane component  38.33 
 
 
305 aa  118  9e-26  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_011899  Hore_04600  binding-protein-dependent transport systems inner membrane component  37.5 
 
 
277 aa  118  9e-26  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_011886  Achl_2899  binding-protein-dependent transport systems inner membrane component  38.33 
 
 
316 aa  118  9e-26  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_009636  Smed_0188  binding-protein-dependent transport systems inner membrane component  33.33 
 
 
277 aa  118  9.999999999999999e-26  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_1418  binding-protein-dependent transport systems inner membrane component  35.19 
 
 
276 aa  117  1.9999999999999998e-25  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_012858  Rleg_6763  binding-protein-dependent transport systems inner membrane component  33.33 
 
 
276 aa  117  3e-25  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.18605  normal 
 
 
-
 
NC_013530  Xcel_2795  binding-protein-dependent transport systems inner membrane component  30.34 
 
 
298 aa  116  5e-25  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2701  binding-protein-dependent transport systems inner membrane component  32.56 
 
 
275 aa  116  5e-25  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.0563997  n/a   
 
 
-
 
NC_007948  Bpro_0701  binding-protein-dependent transport systems inner membrane component  35.29 
 
 
315 aa  115  6.9999999999999995e-25  Polaromonas sp. JS666  Bacteria  normal  0.338666  normal 
 
 
-
 
NC_009620  Smed_3589  binding-protein-dependent transport systems inner membrane component  34.86 
 
 
276 aa  115  7.999999999999999e-25  Sinorhizobium medicae WSM419  Bacteria  normal  0.577285  normal 
 
 
-
 
NC_013595  Sros_2192  putative sugar ABC transporter, permease protein  33.48 
 
 
283 aa  115  8.999999999999998e-25  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_010623  Bphy_4059  binding-protein-dependent transport systems inner membrane component  32.44 
 
 
281 aa  115  8.999999999999998e-25  Burkholderia phymatum STM815  Bacteria  normal  0.965906  normal  0.767737 
 
 
-
 
NC_011661  Dtur_0489  binding-protein-dependent transport systems inner membrane component  30.11 
 
 
274 aa  115  1.0000000000000001e-24  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_008709  Ping_3171  ABC sugar (glycerol) transporter binding protein inner membrane protein  29.8 
 
 
266 aa  114  2.0000000000000002e-24  Psychromonas ingrahamii 37  Bacteria  normal  0.550599  normal 
 
 
-
 
NC_014151  Cfla_0499  binding-protein-dependent transport systems inner membrane component  31.08 
 
 
279 aa  114  3e-24  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.398115  hitchhiker  0.000223606 
 
 
-
 
NC_012853  Rleg_5696  binding-protein-dependent transport systems inner membrane component  33.74 
 
 
283 aa  113  3e-24  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.697019  normal  0.0828938 
 
 
-
 
NC_012669  Bcav_2628  binding-protein-dependent transport systems inner membrane component  35.19 
 
 
303 aa  114  3e-24  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.11213  normal 
 
 
-
 
NC_011366  Rleg2_5746  binding-protein-dependent transport systems inner membrane component  42.53 
 
 
278 aa  114  3e-24  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.405999 
 
 
-
 
NC_013739  Cwoe_5095  binding-protein-dependent transport systems inner membrane component  31.34 
 
 
273 aa  114  3e-24  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.336394 
 
 
-
 
NC_012848  Rleg_4987  binding-protein-dependent transport systems inner membrane component  32.84 
 
 
319 aa  112  8.000000000000001e-24  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_2542  binding-protein-dependent transport systems inner membrane component  34.23 
 
 
275 aa  112  9e-24  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.607728  normal 
 
 
-
 
NC_013595  Sros_3493  binding-protein-dependent transport systems inner membrane component  33.45 
 
 
316 aa  112  9e-24  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.552575 
 
 
-
 
NC_009621  Smed_5860  binding-protein-dependent transport systems inner membrane component  32.84 
 
 
319 aa  111  1.0000000000000001e-23  Sinorhizobium medicae WSM419  Bacteria  normal  0.235146  normal 
 
 
-
 
NC_011661  Dtur_1741  binding-protein-dependent transport systems inner membrane component  30.22 
 
 
281 aa  111  1.0000000000000001e-23  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_012856  Rpic12D_2984  binding-protein-dependent transport systems inner membrane component  28.41 
 
 
276 aa  111  1.0000000000000001e-23  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_0952  binding-protein-dependent transport systems inner membrane component  30.08 
 
 
271 aa  110  2.0000000000000002e-23  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_010682  Rpic_3331  binding-protein-dependent transport systems inner membrane component  29.13 
 
 
277 aa  110  2.0000000000000002e-23  Ralstonia pickettii 12J  Bacteria  normal  normal  0.619722 
 
 
-
 
NC_009921  Franean1_7051  binding-protein-dependent transport systems inner membrane component  39.08 
 
 
279 aa  111  2.0000000000000002e-23  Frankia sp. EAN1pec  Bacteria  normal  0.305839  normal 
 
 
-
 
NC_009380  Strop_0805  binding-protein-dependent transport systems inner membrane component  35.57 
 
 
311 aa  110  2.0000000000000002e-23  Salinispora tropica CNB-440  Bacteria  normal  0.736814  normal 
 
 
-
 
NC_007952  Bxe_B0418  ABC sugar transporter, inner membrane subunit  32.44 
 
 
283 aa  110  3e-23  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_010676  Bphyt_7206  binding-protein-dependent transport systems inner membrane component  32.44 
 
 
283 aa  110  3e-23  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_009338  Mflv_3853  binding-protein-dependent transport systems inner membrane component  33.33 
 
 
275 aa  110  3e-23  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal  0.0623628 
 
 
-
 
NC_014212  Mesil_3058  binding-protein-dependent transport systems inner membrane component  32.92 
 
 
286 aa  109  4.0000000000000004e-23  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_013441  Gbro_1868  binding-protein-dependent transport systems inner membrane component  34.23 
 
 
276 aa  109  4.0000000000000004e-23  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_007604  Synpcc7942_0471  ABC-type sugar transport system permease component-like  32.24 
 
 
276 aa  109  4.0000000000000004e-23  Synechococcus elongatus PCC 7942  Bacteria  normal  normal 
 
 
-
 
NC_013745  Htur_4652  binding-protein-dependent transport systems inner membrane component  33.71 
 
 
292 aa  109  4.0000000000000004e-23  Haloterrigena turkmenica DSM 5511  Archaea  normal  0.0409709  n/a   
 
 
-
 
NC_011899  Hore_19870  binding-protein-dependent transport systems inner membrane component  29.89 
 
 
285 aa  110  4.0000000000000004e-23  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_0809  binding-protein-dependent transport systems inner membrane component  35.56 
 
 
281 aa  109  4.0000000000000004e-23  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_014158  Tpau_1201  binding-protein-dependent transport systems inner membrane component  30.45 
 
 
277 aa  109  5e-23  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_011369  Rleg2_3667  binding-protein-dependent transport systems inner membrane component  36.65 
 
 
296 aa  109  5e-23  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_009012  Cthe_1018  binding-protein-dependent transport systems inner membrane component  31.5 
 
 
289 aa  109  6e-23  Clostridium thermocellum ATCC 27405  Bacteria  normal  0.062951  n/a   
 
 
-
 
NC_004578  PSPTO_3737  ABC transporter, permease protein  31.17 
 
 
266 aa  108  7.000000000000001e-23  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.103253  n/a   
 
 
-
 
NC_007005  Psyr_1740  binding-protein dependent transport system inner membrane protein  31.17 
 
 
266 aa  109  7.000000000000001e-23  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.139142  normal  0.986821 
 
 
-
 
NC_013159  Svir_11600  carbohydrate ABC transporter membrane protein  31.69 
 
 
283 aa  108  1e-22  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_1365  binding-protein-dependent transport systems inner membrane component  32.41 
 
 
275 aa  108  1e-22  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.374311  normal 
 
 
-
 
NC_012791  Vapar_3350  binding-protein-dependent transport systems inner membrane component  33.96 
 
 
274 aa  108  1e-22  Variovorax paradoxus S110  Bacteria  normal  0.610127  n/a   
 
 
-
 
NC_007973  Rmet_2231  binding-protein-dependent transport systems inner membrane component  31.94 
 
 
276 aa  108  1e-22  Cupriavidus metallidurans CH34  Bacteria  normal  0.0964612  normal  0.170787 
 
 
-
 
NC_009952  Dshi_1355  binding-protein-dependent transport systems inner membrane component  31.7 
 
 
404 aa  108  1e-22  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal  0.463288 
 
 
-
 
NC_009952  Dshi_3142  sugar ABC transporter  29.55 
 
 
275 aa  108  1e-22  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.367291  normal 
 
 
-
 
NC_010003  Pmob_1490  binding-protein-dependent transport systems inner membrane component  27.66 
 
 
277 aa  108  1e-22  Petrotoga mobilis SJ95  Bacteria  normal  n/a   
 
 
-
 
NC_008687  Pden_4389  binding-protein-dependent transport systems inner membrane component  31.02 
 
 
267 aa  108  1e-22  Paracoccus denitrificans PD1222  Bacteria  normal  0.998448  normal  0.127678 
 
 
-
 
NC_009921  Franean1_4615  binding-protein-dependent transport systems inner membrane component  37.13 
 
 
295 aa  108  1e-22  Frankia sp. EAN1pec  Bacteria  normal  0.60944  normal 
 
 
-
 
NC_008148  Rxyl_0623  binding-protein-dependent transport systems inner membrane component  32.16 
 
 
285 aa  107  2e-22  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.587185  n/a   
 
 
-
 
NC_013595  Sros_3341  putative sugar ABC transporter, permease protein  31.58 
 
 
292 aa  107  2e-22  Streptosporangium roseum DSM 43021  Bacteria  normal  0.22127  normal  0.118781 
 
 
-
 
NC_012848  Rleg_4865  binding-protein-dependent transport systems inner membrane component  36.02 
 
 
296 aa  107  2e-22  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.174421 
 
 
-
 
NC_010322  PputGB1_1896  binding-protein-dependent transport systems inner membrane component  30.53 
 
 
266 aa  107  2e-22  Pseudomonas putida GB-1  Bacteria  normal  normal  0.141997 
 
 
-
 
NC_010676  Bphyt_6726  binding-protein-dependent transport systems inner membrane component  27.17 
 
 
269 aa  107  3e-22  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_007347  Reut_A2206  binding-protein dependent transport system inner membrane protein  32.41 
 
 
273 aa  107  3e-22  Ralstonia eutropha JMP134  Bacteria  normal  0.91702  n/a   
 
 
-
 
NC_010003  Pmob_0475  binding-protein-dependent transport systems inner membrane component  28.34 
 
 
276 aa  107  3e-22  Petrotoga mobilis SJ95  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_1043  binding-protein-dependent transport systems inner membrane component  35 
 
 
273 aa  106  3e-22  Stackebrandtia nassauensis DSM 44728  Bacteria  decreased coverage  0.00118636  normal  0.712976 
 
 
-
 
NC_010320  Teth514_2195  binding-protein-dependent transport systems inner membrane component  46.55 
 
 
276 aa  107  3e-22  Thermoanaerobacter sp. X514  Bacteria  decreased coverage  0.000532523  n/a   
 
 
-
 
NC_009485  BBta_2225  putative sugar ABC transport system, permease component  29.6 
 
 
268 aa  107  3e-22  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.279383  normal  0.0771654 
 
 
-
 
NC_010501  PputW619_1736  binding-protein-dependent transport systems inner membrane component  30.53 
 
 
266 aa  106  4e-22  Pseudomonas putida W619  Bacteria  normal  0.78404  normal  0.23922 
 
 
-
 
NC_008786  Veis_1881  binding-protein-dependent transport systems inner membrane component  33.79 
 
 
277 aa  106  4e-22  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.31192  normal  0.345507 
 
 
-
 
NC_013595  Sros_5740  binding-protein-dependent transport systems inner membrane component  28.84 
 
 
289 aa  106  5e-22  Streptosporangium roseum DSM 43021  Bacteria  normal  0.872391  normal  0.176709 
 
 
-
 
NC_012803  Mlut_04600  ABC-type sugar transport system, permease component  34.86 
 
 
295 aa  106  5e-22  Micrococcus luteus NCTC 2665  Bacteria  normal  0.539803  n/a   
 
 
-
 
NC_009616  Tmel_1818  binding-protein-dependent transport systems inner membrane component  26.78 
 
 
279 aa  106  5e-22  Thermosipho melanesiensis BI429  Bacteria  normal  0.675174  n/a   
 
 
-
 
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