| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3142 |
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| Symbol | ugpE2 |
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| ID | 5712198 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 3308891 |
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| End bp | 3309718 |
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| Gene Length | 828 bp |
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| Protein Length | 275 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641269069 |
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| Product | sugar ABC transporter |
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| Protein accession | YP_001534476 |
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| Protein GI | 159045682 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0395] ABC-type sugar transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.367291 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGGCA AACAACGCAA ACAATTCTGG AGCGCGGTCC ATGCGGTCCT GATCATCGCG
GCGATGTTCG TGATGCTGGT GCCGATCCTG TGGATCTTCC TCGCGGCGTT CAAATCCCAC
GTGGATGTCT ATCAACTCAA GCTGTTCTTC ACGCCGACGC TGGAAAACTT CGGCACGGTG
TTCGACGACC CCTACCGGCT GGGCGAGAAG CTGTTCAACT CCACCGTGGT CGCCCTGGTC
ACGGTGGTGA TCGCCATCCC CATCGCCACG CTCGCGGCCT ATTCCTTCAG CCGGTTCCGG
CTGGTGGGCG AGACCGCGAT GCTGGTGGTG ATCCTGGCCA CGCAATTCCT GCCGGCGGTG
GTGATCATCC TGCCCTTTTT CATCATGTTC CGGGATATCG GCCTGCTGGA TACGCGGCTG
GGCCTGATCC TGGTGAACCT CGCCATCGTG ATGCCGTTCG CGATCTGGAT GATCAAGGGC
TTCATCGACG GCATCCCCCT GGACACCGAA GAGGCGGCGA TGGTCGACGG CTCCTCGCGG
TTGCAGGTGA TCTGGAACAT CGTGCTGCCC ATGGCCGCCC CGGGTCTGCT GACCTCCGGC
ATCTTCTGTT TCATCATCGC CTGGAACGAG TTCCTTTTCG CGCTGATCCT GACCAACAAG
GACGCGGTGA CGCTGCCCAT CGGGCTCGCG CTCTTCAAGG GGGAGGAAGG CGACCTGTGG
AACCTGCTGA GTGCAGCGGG GATCATCATC ATGGCGCCGA TGTTCGTGCT CGCCCTGATG
ATCCGGAAAT ACTTTGTCCA GGGCATGACG ATGGGGGCGG TGCGGTGA
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| Protein sequence | MTGKQRKQFW SAVHAVLIIA AMFVMLVPIL WIFLAAFKSH VDVYQLKLFF TPTLENFGTV
FDDPYRLGEK LFNSTVVALV TVVIAIPIAT LAAYSFSRFR LVGETAMLVV ILATQFLPAV
VIILPFFIMF RDIGLLDTRL GLILVNLAIV MPFAIWMIKG FIDGIPLDTE EAAMVDGSSR
LQVIWNIVLP MAAPGLLTSG IFCFIIAWNE FLFALILTNK DAVTLPIGLA LFKGEEGDLW
NLLSAAGIII MAPMFVLALM IRKYFVQGMT MGAVR
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