| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_2225 |
|---|
| Symbol | |
|---|
| ID | 5150123 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | + |
|---|
| Start bp | 2301005 |
|---|
| End bp | 2301811 |
|---|
| Gene Length | 807 bp |
|---|
| Protein Length | 268 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 640557154 |
|---|
| Product | putative sugar ABC transport system, permease component |
|---|
| Protein accession | YP_001238310 |
|---|
| Protein GI | 148253725 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0395] ABC-type sugar transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.279383 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.0771654 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACACGA TTCCGGGCCG TCGCGTCATC ATGGCGGTGT TCCTGGTCTT CCTGCTGTTG
CCGATCTATT GGCTCGTCAA CATGAGCTTC AAGACCAACA ACGAGATCGT CACGACGATG
ACGCTGTGGC CGCATCAGCC GACGATCGCA AACTACATGC GGATCTTCAC CGACGAGAGC
TGGTATTCCG GCTACATCAA CTCGCTGAAA TACGTCATCC TCAACACGGT GATCTCGATC
CTGGTGGCGC TGCCGGCGGC CTACGCGTTC TCGCGCTACC GCTTCCTCGG CGACAAGCAC
CTGTTCTTCT GGCTGTTGTC GAACCGCATG GCGCCGGCCG CGGTCTATGC GCTGCCGTTC
TTCAACCTCT ATTCGGCGAT CGGCCTGTTC GATACGCCGT GGGCGGTGGC GCTGGCGCAT
TGCATCTTCA ACATTCCGCT CGCCGTCTGG ATCCTCGAGG GCTTCGTGTC GTCGGTGCCG
CGCGAGATCG ACGAGACCGC CTTCCTCGAC GGCTACTCGT TCCCGCGCTT TTTCGTGAAG
ATCCTGGTGC CGCTGATCGC GAGCGGCATC GGCGTCGCGG CCTTCTTCTG CTTCATGTTC
TCCTGGGTCG AGCTCTTGCT CGCGCGCACC TTGACCTCGG TCGATGCCAA GCCGATCTCG
GCGGTGATGA CCCGCACCGT CTCGGCGTCC GGCATGGATT GGGGCCTGCT GGCGGCCGCC
GGCGTGCTCA CGATCATCCC CGGCGCGCTC GTCATCTGGT TCGTCCGCAA CTACATCGCG
CGCGGCTTCG CGCTGGGACG GGTGTGA
|
|---|
| Protein sequence | MNTIPGRRVI MAVFLVFLLL PIYWLVNMSF KTNNEIVTTM TLWPHQPTIA NYMRIFTDES
WYSGYINSLK YVILNTVISI LVALPAAYAF SRYRFLGDKH LFFWLLSNRM APAAVYALPF
FNLYSAIGLF DTPWAVALAH CIFNIPLAVW ILEGFVSSVP REIDETAFLD GYSFPRFFVK
ILVPLIASGI GVAAFFCFMF SWVELLLART LTSVDAKPIS AVMTRTVSAS GMDWGLLAAA
GVLTIIPGAL VIWFVRNYIA RGFALGRV
|
|---|
| |