Gene Sros_1500 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_1500 
Symbol 
ID8664776 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp1584454 
End bp1585335 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content67% 
IMG OID 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_003337236 
Protein GI271963040 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.347509 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.943286 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGTCC AGACGGTCCA TCGGCCGCGG CTGGCCGCGT CCGCACCGGA GCCCCGGCTC 
AGAGGTGGCG AGAGGAACAA GGTCAGCCGC TGGCAGATCT GGGTCCCGCT CGGGCTCTAC
CTGCTGTTCA CGCTCGTCCC CTTCTACTGG ATGCTGGTGT TCGCGTTCCG GCCCCGGGGT
TCGAGCTCGC TGCTGCCCTG GCCGATCACG TTCGACAACT TCGCGACGGT CTGGAACGAG
CTCGGCTTCG CGATGTTCTT CAAGAACAGC CTGATGGTCG GCGCCGCCTC CCTGATCATG
ACCACGGTCA TCGCGCTGGC CGGCGGCTAC GCCCTGGCCC GCTACGAGTT CCGCGGCAAG
CGGCTGTTCA TGCTCGGCAT GCTCTGCACC CAGTTCATCC CCGGCGCCAT GATGCTGATC
CCGCTGTTCG AGATCTTCCG GACCCTCGGC CTGGTCAACT CGCTGTGGAG TCTGGTGATC
GCCGAGACGG TCTTCCAGCT CCCGCTCTCC CTCATCCTGA TCAGCGGCTT CATCAAGAAC
GTGCCGGTGG AGCTGGAGCA GGCCGCCTGG GTGGACGGCT GCGGCCGGCT GCGCGCCTTC
TTCGCCGTGG TGCTGCCGCT GCTGCGCCCG GCGCTGGTCG CGGTCGGCTC GTTCGCCTTC
ATCCACAGCT GGAACAACTT CCTGTTCGCG CTGATGTTCG TCAACGAGCA GGAGAAGTTC
ACGGTGCCCG TCGGCCTCGC CTACACGCTG GGCGAGTTCA GCGTCGACTT CGGCGCGCTG
GCCGCGGGCG GCGTCGTCGC CGCCGTGCCC GTCGTGCTGG TCTTCGCCGT CATCCAGCGC
TACCTGGTGC AGGGCATGTC GGCCGGAGCG GTGAAGGGGT GA
 
Protein sequence
MTVQTVHRPR LAASAPEPRL RGGERNKVSR WQIWVPLGLY LLFTLVPFYW MLVFAFRPRG 
SSSLLPWPIT FDNFATVWNE LGFAMFFKNS LMVGAASLIM TTVIALAGGY ALARYEFRGK
RLFMLGMLCT QFIPGAMMLI PLFEIFRTLG LVNSLWSLVI AETVFQLPLS LILISGFIKN
VPVELEQAAW VDGCGRLRAF FAVVLPLLRP ALVAVGSFAF IHSWNNFLFA LMFVNEQEKF
TVPVGLAYTL GEFSVDFGAL AAGGVVAAVP VVLVFAVIQR YLVQGMSAGA VKG