Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_1740 |
Symbol | |
ID | 3367245 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 1977203 |
End bp | 1978003 |
Gene Length | 801 bp |
Protein Length | 266 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637652086 |
Product | binding-protein dependent transport system inner membrane protein |
Protein accession | YP_234826 |
Protein GI | 66044985 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0395] ABC-type sugar transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.139142 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.986821 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTCTGC GCAAAACCAT ACCGCTGTGG ATTTACCTGT TGTTTCTGCT GGTGCCGATC TACTGGCTGG TCAACATGTC GTTCAAGACC AATACCGAGA TCCTCGGTGG CCTGACCCTG TGGCCGCAGG ATTTTACCCT GGCCAACTAC AAGGTGATCT TCACCGACGA GAGCTGGTAC AGCGGCTACC TCAACTCGCT GTACTACGTG TGCCTCAATA CCGTGATATC GCTAAGCGTC GCATTGCCGG CAGCCTACGC GTTTTCACGC TATCGTTTTC TCGGCGACAA GCACCTGTTC TTCTGGCTGC TGACCAACCG CATGGCGCCA CCGGCAGTAT TCCTGCTGCC GTTTTTCCAG CTGTATTCGT CCATCGGCCT ATTTGACACG CACATCGCCG TGGCACTGGC GCACTGTCTG TTCAACGTTC CGCTGGCCGT ATGGATTCTG GAGGGCTTCA TGTCCGGCGT TCCCAAGGAG ATCGATGAAA CGGCCTACAT CGACGGTTAC AGCTTTCCCA AGTTTTTCGT GAAGATTTTC ATCCCGCTGA TTGGCTCGGG AATCGGTGTC ACAGCGTTTT TCTGCTTCAT GTTTTCCTGG GTCGAGCTGT TGTTGGCGCG CACCCTGACT TCGGTGAACG CCAAGCCGAT CGCTGCGGTG ATGACCCGCA CCGTGTCGGC ATCGGGTATC GATTGGGGGG TGCTGGCGGC GGCAGGGGTG TTGACCATCC TGCCGGGCAT GCTGGTGATC TGGTTCGTTC GCAACCATGT GGTCAAGGGC TTTGCTCTTG GTCGTGTCTG A
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Protein sequence | MSLRKTIPLW IYLLFLLVPI YWLVNMSFKT NTEILGGLTL WPQDFTLANY KVIFTDESWY SGYLNSLYYV CLNTVISLSV ALPAAYAFSR YRFLGDKHLF FWLLTNRMAP PAVFLLPFFQ LYSSIGLFDT HIAVALAHCL FNVPLAVWIL EGFMSGVPKE IDETAYIDGY SFPKFFVKIF IPLIGSGIGV TAFFCFMFSW VELLLARTLT SVNAKPIAAV MTRTVSASGI DWGVLAAAGV LTILPGMLVI WFVRNHVVKG FALGRV
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