Gene Psyr_1740 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_1740 
Symbol 
ID3367245 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp1977203 
End bp1978003 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content56% 
IMG OID637652086 
Productbinding-protein dependent transport system inner membrane protein 
Protein accessionYP_234826 
Protein GI66044985 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0395] ABC-type sugar transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.139142 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.986821 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCTGC GCAAAACCAT ACCGCTGTGG ATTTACCTGT TGTTTCTGCT GGTGCCGATC 
TACTGGCTGG TCAACATGTC GTTCAAGACC AATACCGAGA TCCTCGGTGG CCTGACCCTG
TGGCCGCAGG ATTTTACCCT GGCCAACTAC AAGGTGATCT TCACCGACGA GAGCTGGTAC
AGCGGCTACC TCAACTCGCT GTACTACGTG TGCCTCAATA CCGTGATATC GCTAAGCGTC
GCATTGCCGG CAGCCTACGC GTTTTCACGC TATCGTTTTC TCGGCGACAA GCACCTGTTC
TTCTGGCTGC TGACCAACCG CATGGCGCCA CCGGCAGTAT TCCTGCTGCC GTTTTTCCAG
CTGTATTCGT CCATCGGCCT ATTTGACACG CACATCGCCG TGGCACTGGC GCACTGTCTG
TTCAACGTTC CGCTGGCCGT ATGGATTCTG GAGGGCTTCA TGTCCGGCGT TCCCAAGGAG
ATCGATGAAA CGGCCTACAT CGACGGTTAC AGCTTTCCCA AGTTTTTCGT GAAGATTTTC
ATCCCGCTGA TTGGCTCGGG AATCGGTGTC ACAGCGTTTT TCTGCTTCAT GTTTTCCTGG
GTCGAGCTGT TGTTGGCGCG CACCCTGACT TCGGTGAACG CCAAGCCGAT CGCTGCGGTG
ATGACCCGCA CCGTGTCGGC ATCGGGTATC GATTGGGGGG TGCTGGCGGC GGCAGGGGTG
TTGACCATCC TGCCGGGCAT GCTGGTGATC TGGTTCGTTC GCAACCATGT GGTCAAGGGC
TTTGCTCTTG GTCGTGTCTG A
 
Protein sequence
MSLRKTIPLW IYLLFLLVPI YWLVNMSFKT NTEILGGLTL WPQDFTLANY KVIFTDESWY 
SGYLNSLYYV CLNTVISLSV ALPAAYAFSR YRFLGDKHLF FWLLTNRMAP PAVFLLPFFQ
LYSSIGLFDT HIAVALAHCL FNVPLAVWIL EGFMSGVPKE IDETAYIDGY SFPKFFVKIF
IPLIGSGIGV TAFFCFMFSW VELLLARTLT SVNAKPIAAV MTRTVSASGI DWGVLAAAGV
LTILPGMLVI WFVRNHVVKG FALGRV